{"id":"W2587457068","doi":"10.1101/104729","title":"Predicting susceptibility to tuberculosis based on gene expression profiling in dendritic cells","year":2017,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Tuberculosis Research and Epidemiology","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Montréal; Centre Hospitalier Universitaire Sainte-Justine","funders":"National Institutes of Health","keywords":"Tuberculosis; Biology; Gene; Disease; Mycobacterium tuberculosis; Gene expression profiling; Immunology; Heritability; Genome-wide association study; Virology; Gene expression; Genetics; Medicine; Genotype; Single-nucleotide polymorphism; Pathology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005042679,0.0002478902,0.0004922018,0.0005527894,0.0001625002,0.0007070542,0.000151958,0.0004033281,0.0007466485],"category_scores_gemma":[0.001216788,0.0001096402,0.000350389,0.0004673109,0.0001415585,0.0001647217,0.000191318,0.0004922908,0.0003862221],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000175377,"about_ca_system_score_gemma":0.0001465566,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005703698,"about_ca_topic_score_gemma":0.0005782405,"domain_scores_codex":[0.9997839,0.00005902928,0.00001332408,0.00007937313,0.00003251015,0.00003180451],"domain_scores_gemma":[0.9994259,0.0003070912,0.00008412854,0.00005120452,0.0000742322,0.00005751262],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00153025,0.0003992444,0.8005713,0.00008641193,0.0002344278,0.0001848377,0.00008498758,0.0053725,0.1585084,0.000160224,0.00137615,0.03149125],"study_design_scores_gemma":[0.000116597,0.0007950665,0.7912759,0.00005333934,0.0003353617,0.0005437557,0.0004162751,0.1365684,0.06485102,0.002092065,0.002899388,0.00005290845],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9929909,0.0004432676,0.004198491,0.0002102664,0.00003182906,0.00002238156,0.001556456,0.00004658107,0.0004997675],"genre_scores_gemma":[0.9939925,0.0002073093,0.003934946,0.000114594,0.00003052975,0.00001951844,0.001361055,0.000009434253,0.0003299849],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0007466485,"threshold_uncertainty_score":0.002666891,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02914944669277918,"score_gpt":0.2955672656534797,"score_spread":0.2664178189607005,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}