{"id":"W259058778","doi":"10.31274/ans_air-180814-1323","title":"Accounting for Complex Population Structure in Pedigree and Genomic Analyses of Laying Chickens","year":2015,"lang":"en","type":"report","venue":"","topic":"Animal Nutrition and Physiology","field":"Agricultural and Biological Sciences","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"Nutrasource","funders":"","keywords":"Heritability; Biology; Population; Genomic selection; Line (geometry); Composition (language); Genetics; Statistics; Mathematics; Demography; Gene; Single-nucleotide polymorphism; Genotype","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00496845,0.0006023045,0.0004228401,0.0005401406,0.0004839099,0.0007922133,0.000443149,0.0003985213,0.000559041],"category_scores_gemma":[0.01585627,0.0003305102,0.0006463949,0.0006421626,0.0003633043,0.0007581677,0.0005426213,0.0004922576,0.0001843545],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000443914,"about_ca_system_score_gemma":0.0006617259,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01039725,"about_ca_topic_score_gemma":0.02129587,"domain_scores_codex":[0.9972516,0.001829348,0.000100478,0.0005368828,0.0001746709,0.0001071579],"domain_scores_gemma":[0.9920648,0.005183282,0.0006710875,0.00152903,0.0004405802,0.0001112035],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"simulation_or_modeling","study_design_scores_codex":[0.0003371096,0.0001637647,0.6978152,0.00007333055,0.001152697,0.0004022279,0.0003999718,0.2018968,0.01982612,0.001302654,0.0001759803,0.07645407],"study_design_scores_gemma":[0.00004195874,0.0003113906,0.4516599,0.00002626427,0.0004312379,0.00041194,0.000140356,0.5362528,0.006284925,0.003795873,0.0006023231,0.0000409027],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"methods","genre_scores_codex":[0.9048162,0.0001430557,0.09453743,0.00003367432,0.000007317629,0.00001953364,0.0001221035,0.00008383093,0.0002367772],"genre_scores_gemma":[0.970471,0.00006907219,0.02891115,0.00001867949,0.000005517374,0.00001742918,0.000274971,0.00002850027,0.000203606],"genre_candidate":"methods","genre_consensus":null,"teacher_disagreement_score":0.01039725,"threshold_uncertainty_score":0.02627599,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.2474391291384512,"score_gpt":0.3771062654594815,"score_spread":0.1296671363210303,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}