{"id":"W2590823482","doi":"10.1093/nar/gkx094","title":"A transposon-derived small RNA regulates gene expression in Salmonella Typhimurium","year":2017,"lang":"en","type":"article","venue":"Nucleic Acids Research","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":37,"is_retracted":false,"has_abstract":true,"ca_institutions":"Western University","funders":"","keywords":"Biology; Transposable element; Salmonella; Gene; Genetics; Gene expression; DNA Transposable Elements; RNA; Microbiology; Enterobacteriaceae; Bacteria; Escherichia coli; Molecular biology; Genome","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001042942,0.000254131,0.0001417718,0.0002227957,0.0001025503,0.0002041959,0.00007331956,0.0001432435,0.0005473371],"category_scores_gemma":[0.0001145278,0.0001191017,0.0002054828,0.00008464896,0.0001851828,0.00005600117,0.0001048676,0.000194083,0.0002976541],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002326786,"about_ca_system_score_gemma":0.0001690135,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001025104,"about_ca_topic_score_gemma":0.001213122,"domain_scores_codex":[0.9999049,0.00001867848,0.000006048777,0.00001909047,0.0000264263,0.00002479814],"domain_scores_gemma":[0.9998938,0.00002694207,0.0000251848,0.000008262034,0.00001763586,0.00002825916],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00004264891,0.000007697701,0.0002062529,0.000006357066,8.449623e-7,0.00002067041,0.000007290845,0.00002176393,0.9994173,0.00001811778,0.00001064677,0.0002404307],"study_design_scores_gemma":[0.0000191059,0.0008363215,0.0321527,0.00001190206,0.00001846001,0.0002888771,0.00013099,0.001819206,0.9626517,0.00009391982,0.001968007,0.000008883983],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9978523,0.000350919,0.0006950632,0.00005143473,0.00001528718,0.000006276409,0.0001155407,0.00005368203,0.0008594308],"genre_scores_gemma":[0.9965034,0.0002361686,0.001196365,0.00005468245,0.000005236477,0.00001351271,0.0003190291,0.00001925442,0.001652425],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001025104,"threshold_uncertainty_score":0.00203824,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.1062812746347028,"score_gpt":0.3274415028539839,"score_spread":0.2211602282192811,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}