{"id":"W2592435612","doi":"10.1128/microbiolspec.tbtb2-0005-2015","title":"Epigenetic Phosphorylation Control of <i>Mycobacterium tuberculosis</i> Infection and Persistence","year":2017,"lang":"en","type":"review","venue":"Microbiology Spectrum","topic":"Tuberculosis Research and Epidemiology","field":"Medicine","cited_by":30,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"University of British Columbia; British Columbia Lung Association","keywords":"Mycobacterium tuberculosis; Biology; Phosphorylation; Serine; Kinase; Threonine; Epigenetics; Antimycobacterial; Tuberculosis; Microbiology; Protein phosphorylation; Cell biology; Protein kinase A; Genetics; Gene; Medicine","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0006176126,0.0004340547,0.002848672,0.0003057057,0.0001481418,0.00001566858,0.0001662417,0.0008430128,0.0001260244],"category_scores_gemma":[0.0004304587,0.0003349097,0.0005998398,0.0001088833,0.0006567638,0.00004796742,0.0001116441,0.0006523727,0.00009315447],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001564213,"about_ca_system_score_gemma":0.0002607062,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002363311,"about_ca_topic_score_gemma":0.00008717848,"domain_scores_codex":[0.9974822,0.0004565926,0.0007815932,0.0006521172,0.0000596316,0.0005678231],"domain_scores_gemma":[0.9981382,0.0002963269,0.0006135418,0.0006978214,0.00007931671,0.0001748147],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0003750951,0.0003347533,0.0196836,0.03702077,0.003553526,0.00007741572,0.00007115716,8.3978e-7,0.01005181,0.0001888764,0.00284782,0.9257944],"study_design_scores_gemma":[0.0007280878,0.0007018063,0.003072815,0.003077894,0.001749649,0.001601476,0.000002202305,0.000006535489,0.0001913423,0.00002968978,0.9885595,0.0002790155],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.001278763,0.9958381,0.00006736754,0.0006666615,0.0003464228,0.001079197,0.0001785739,0.00003433338,0.0005105602],"genre_scores_gemma":[0.008666235,0.9901091,0.00006108409,0.0001539171,0.0002275857,0.00006488956,0.0004065255,0.00004101942,0.0002696759],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9857117,"threshold_uncertainty_score":0.9999103,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0544361161165931,"score_gpt":0.3405151272702071,"score_spread":0.286079011153614,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}