{"id":"W2593229126","doi":"10.3389/fmicb.2017.00369","title":"Genotypes Associated with Listeria monocytogenes Isolates Displaying Impaired or Enhanced Tolerances to Cold, Salt, Acid, or Desiccation Stress","year":2017,"lang":"en","type":"article","venue":"Frontiers in Microbiology","topic":"Listeria monocytogenes in Food Safety","field":"Biochemistry, Genetics and Molecular Biology","cited_by":145,"is_retracted":false,"has_abstract":true,"ca_institutions":"Public Health Agency of Canada; Simon Fraser University; University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada; Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung; Alberta Innovates; Alberta Innovates Bio Solutions; University of British Columbia; National Science Foundation","keywords":"Listeria monocytogenes; Biology; Plasmid; Desiccation; Genotype; Serotype; Genome; Phenotype; Gene; Pathogen; Outbreak; Microbiology; Genetics; Bacteria; Virology; Botany","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0002283665,0.0003586075,0.0004973763,0.00009599396,0.0003565328,0.0001110174,0.0008378983,0.0003857952,0.00001963749],"category_scores_gemma":[0.000283938,0.0002717519,0.00006776017,0.000107518,0.0002763214,0.00002537041,0.0003902091,0.0001044331,0.000006029849],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001221681,"about_ca_system_score_gemma":0.0001906623,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00005602449,"about_ca_topic_score_gemma":0.002664619,"domain_scores_codex":[0.9980488,0.0001757809,0.000411873,0.0007491042,0.00004908228,0.0005653303],"domain_scores_gemma":[0.9985521,0.00002435646,0.0003716413,0.0008324378,0.0001204138,0.00009900742],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.004423219,0.00007509548,0.04126866,0.0000284958,0.0001963663,0.00001156086,0.0002300245,0.0001307257,0.950433,0.000002674405,0.0009623951,0.002237829],"study_design_scores_gemma":[0.001645951,0.001032694,0.01273871,0.0001178718,0.00004164976,0.00002062847,0.0001964275,0.00003886209,0.9791664,0.00001081355,0.004490376,0.0004995603],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9846727,0.0008070674,0.01208566,0.0001383061,0.001290231,0.0006370149,0.0002706248,0.00002835824,0.00006998903],"genre_scores_gemma":[0.986395,0.0002144684,0.01158334,0.0002960089,0.0001752864,0.0001398426,0.0003842695,0.0000538854,0.0007578676],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0287335,"threshold_uncertainty_score":0.9999735,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0397301762070103,"score_gpt":0.3018599804759659,"score_spread":0.2621298042689555,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}