{"id":"W2594442246","doi":"10.1139/facets-2016-0018","title":"Characterization of “<i>Brachyspira hampsonii</i>” clades I and II isolated from commercial swine in Western Canada","year":2016,"lang":"en","type":"article","venue":"FACETS","topic":"Veterinary medicine and infectious diseases","field":"Veterinary","cited_by":5,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Saskatchewan","funders":"Canadian Swine Health Board","keywords":"Clade; Biology; Pathogen; Multilocus sequence typing; Microbiology; Virulence; Gene; Phylogenetics; Genetics; Genotype","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":true,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002291888,0.0004100994,0.0003112309,0.0009442578,0.001367696,0.0008065788,0.0004468171,0.0003696569,0.0003851494],"category_scores_gemma":[0.0004242231,0.0002617799,0.0003197918,0.001015281,0.0004586061,0.0002369393,0.0003741067,0.0003306936,0.0001875575],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.002022187,"about_ca_system_score_gemma":0.004363269,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.6051707,"about_ca_topic_score_gemma":0.7010479,"domain_scores_codex":[0.9995603,0.00001666116,0.00003154676,0.0001053119,0.0001614044,0.0001246287],"domain_scores_gemma":[0.9995678,0.00002686843,0.00008554453,0.00001952713,0.0002134329,0.00008679849],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0003542366,0.00008170029,0.5027063,0.000166116,0.00004902188,0.001216594,0.003158537,0.0002649875,0.4811876,0.0001180271,0.0004484006,0.01024861],"study_design_scores_gemma":[0.000007437546,0.0001533262,0.9752079,0.00003110976,0.00005737797,0.001031405,0.003736582,0.0003711356,0.01581571,0.00001618726,0.003557535,0.0000142827],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.996574,0.0002540378,0.0003394397,0.00006083208,0.000009518605,0.00006585525,0.0007438018,0.000007019175,0.001945477],"genre_scores_gemma":[0.9945604,0.0004224352,0.001817534,0.0001233817,0.000009103956,0.00002840802,0.002005805,0.000007809903,0.001025081],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3948293,"threshold_uncertainty_score":0.794309,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02834763071049028,"score_gpt":0.270019836925367,"score_spread":0.2416722062148767,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}