{"id":"W2594621310","doi":"10.1038/srep43613","title":"Chromatin states shape insertion profiles of the piggyBac, Tol2 and Sleeping Beauty transposons and murine leukemia virus","year":2017,"lang":"en","type":"article","venue":"Scientific Reports","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":62,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Institute of Genetics; National Cancer Institute; Precursory Research for Embryonic Science and Technology; Japan Science and Technology Agency; Japan Society for the Promotion of Science","keywords":"Chromatin; CTCF; Cohesin; Biology; Transposable element; Transposase; Genetics; Murine leukemia virus; Gene; Cell biology; Histone; Genome; Enhancer; Molecular biology; Transcription factor","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001121612,0.0001651454,0.00009718795,0.0003355047,0.00005230257,0.0002742962,0.00009316939,0.0001559574,0.0006046261],"category_scores_gemma":[0.0001764745,0.0001336974,0.0001680146,0.0001904233,0.0001424329,0.000126508,0.0001508337,0.000206388,0.0001455054],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002242671,"about_ca_system_score_gemma":0.00007334074,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0009191464,"about_ca_topic_score_gemma":0.001340387,"domain_scores_codex":[0.9998716,0.00001733365,0.000008770337,0.00003899603,0.00003547299,0.00002775923],"domain_scores_gemma":[0.9998541,0.00003122101,0.00005334298,0.0000122968,0.00002331594,0.00002560823],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00003761406,0.000004058969,0.001208598,0.00000652392,0.000002683541,0.000006247476,0.00001155819,0.00005768791,0.9980239,0.00002116625,0.000005321257,0.0006146524],"study_design_scores_gemma":[0.000004448693,0.0001652981,0.07397332,0.00000396337,0.00001934247,0.0001090818,0.0000534957,0.002034568,0.9229999,0.00003854249,0.0005877066,0.00001031894],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9971941,0.0002371143,0.001955093,0.000006626896,0.000002400119,0.000005811498,0.0002032245,0.0000268148,0.0003688977],"genre_scores_gemma":[0.9975871,0.0001108294,0.0009655085,0.00001363297,0.000001448625,0.000008730594,0.0005459643,0.00001998577,0.0007468692],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0009191464,"threshold_uncertainty_score":0.002022684,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.007337713038203703,"score_gpt":0.2222307653550468,"score_spread":0.2148930523168431,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}