{"id":"W2595451031","doi":"10.1111/mmi.13672","title":"Morphology heterogeneity within a <i>Campylobacter jejuni</i> helical population: the use of calcofluor white to generate rod‐shaped <i>C. jejuni</i> 81‐176 clones and the genetic determinants responsible for differences in morphology within 11168 strains","year":2017,"lang":"en","type":"article","venue":"Molecular Microbiology","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":23,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"Wellcome Trust","keywords":"Biology; Campylobacter jejuni; Frameshift mutation; Peptidoglycan; Genetics; Complementation; Gene; Mutant; Mutation; Plasmid; Microbiology; Bacteria","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001112614,0.0004207867,0.0009766973,0.00005406376,0.000538906,0.0001079105,0.001014188,0.0004691827,0.00003269306],"category_scores_gemma":[0.0007221028,0.0001620271,0.000219989,0.0001829792,0.001233907,0.0000835106,0.0005316099,0.0002959752,0.000006945571],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002466906,"about_ca_system_score_gemma":0.00003083655,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001569161,"about_ca_topic_score_gemma":0.007971765,"domain_scores_codex":[0.9956293,0.001738439,0.0009379283,0.0008907856,0.00008333434,0.0007202212],"domain_scores_gemma":[0.9977498,0.0007993783,0.0006319046,0.0005501254,0.0001320406,0.0001367434],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0008807034,0.0000697604,0.1916561,0.000009525454,0.00004942674,0.00003911469,0.0001983273,0.0000713938,0.8055052,0.0002862255,0.0001094794,0.001124719],"study_design_scores_gemma":[0.001756014,0.000909698,0.9624381,0.00003618632,0.00008643383,0.0006600172,0.00009721663,0.0005465286,0.03102872,0.0009808207,0.0009701567,0.0004900781],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9916037,0.0003776274,0.0001463773,0.005957816,0.0003976732,0.001168233,0.0003212124,0.00002282457,0.000004569838],"genre_scores_gemma":[0.9935132,0.00008024683,0.00139354,0.004569337,0.0001082787,0.0001786005,0.00007960951,0.000007862761,0.00006938309],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7744765,"threshold_uncertainty_score":0.6607275,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0580887755766735,"score_gpt":0.2708455394070088,"score_spread":0.2127567638303353,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}