{"id":"W2597156732","doi":"10.1093/biolreprod/83.s1.267","title":"Transcriptome Analysis of In Vitro- and In Vivo-Produced Preimplantation Porcine Embryos by 454 Pyrosequencing.","year":2010,"lang":"en","type":"article","venue":"Biology of Reproduction","topic":"Animal Genetics and Reproduction","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Alberta","funders":"","keywords":"Biology; cDNA library; Complementary DNA; Embryo; Pyrosequencing; Transcriptome; Genetics; Blastocyst; Genome; Expressed sequence tag; Molecular biology; Gene; Computational biology; Embryogenesis; Gene expression","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004964251,0.0001067315,0.0002623852,0.0002814573,0.0000178652,0.000002296955,0.00006563884,0.0001911305,0.000007705822],"category_scores_gemma":[0.0001187469,0.0001018566,0.0000545519,0.0003910422,0.000166792,0.000005926098,0.00001994378,0.0001039152,1.429185e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000006868857,"about_ca_system_score_gemma":0.00002544093,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003803202,"about_ca_topic_score_gemma":0.0002583346,"domain_scores_codex":[0.9987652,0.00005687243,0.0003633891,0.0006306529,0.00005450018,0.0001293302],"domain_scores_gemma":[0.99935,0.000004833767,0.0001773306,0.0003579838,0.00008688302,0.00002296574],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.000332422,0.00007496373,0.05754085,0.0000190166,0.00007417874,2.03521e-7,0.00009038813,0.00007227323,0.9392563,0.00001751184,0.00002737494,0.002494534],"study_design_scores_gemma":[0.000307603,0.0001945053,0.06739565,0.000003000559,0.00006143219,0.00001062164,0.00005142452,0.00005246126,0.9306828,0.0000355228,0.001113517,0.00009144216],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9977736,0.001476477,0.0001019497,0.0001597743,0.0002391551,0.0001857751,0.00002898977,0.000004686327,0.00002960206],"genre_scores_gemma":[0.998497,0.0006457273,0.00040509,0.000006710287,0.0001060679,0.00001073133,0.0002256829,0.000008219538,0.00009478589],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.009854808,"threshold_uncertainty_score":0.415359,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.00821671928233426,"score_gpt":0.2529390832027563,"score_spread":0.2447223639204221,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}