{"id":"W2597781578","doi":"10.1128/aac.02601-16","title":"A Novel Hybrid Plasmid Carrying Multiple Antimicrobial Resistance and Virulence Genes in Salmonella enterica Serovar Dublin","year":2017,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":50,"is_retracted":false,"has_abstract":true,"ca_institutions":"Ste. Anne's Hospital; Public Health Agency of Canada","funders":"","keywords":"Plasmid; Virulence; Salmonella enterica; Microbiology; Biology; Salmonella; Serotype; Enterobacteriaceae; Operon; Insertion sequence; Antibiotic resistance; Gene; Virology; Genetics; Antibiotics; Escherichia coli; Bacteria; Transposable element; Genome","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003002334,0.0002946289,0.0002727255,0.0008147264,0.0001957262,0.0005098328,0.0003579166,0.0003043944,0.001093671],"category_scores_gemma":[0.0002801049,0.0001809984,0.0004041849,0.0005448924,0.0003887116,0.0003319666,0.0008573152,0.0005372779,0.000341929],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005150978,"about_ca_system_score_gemma":0.0003820441,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006681411,"about_ca_topic_score_gemma":0.0005829106,"domain_scores_codex":[0.9997118,0.00003485995,0.00002978717,0.00006553568,0.0001116168,0.00004631593],"domain_scores_gemma":[0.9997576,0.00005524798,0.0000567624,0.00002647583,0.00002840458,0.00007558947],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0004266299,0.000144115,0.002909334,0.0001477409,0.00002896922,0.0004559788,0.00005723175,0.0001890528,0.9845232,0.0007839116,0.0000974313,0.01023641],"study_design_scores_gemma":[0.0003117412,0.006409854,0.06423387,0.00006280746,0.0002350102,0.009621536,0.0004548935,0.003555987,0.8917246,0.0009240149,0.02235936,0.0001062058],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9845967,0.0004795034,0.01172924,0.0001221258,0.00005257519,0.0001042624,0.0005718856,0.0001192728,0.00222449],"genre_scores_gemma":[0.9803488,0.0002454837,0.01371675,0.0000469824,0.00001523243,0.00006420337,0.002091958,0.00003520428,0.003435502],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001093671,"threshold_uncertainty_score":0.00373733,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02855123185126678,"score_gpt":0.2470147396860153,"score_spread":0.2184635078347485,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}