{"id":"W2598354823","doi":"10.4238/gmr16019522","title":"SNP detection using RNA-sequences of candidate genes associated with puberty in cattle","year":2017,"lang":"en","type":"article","venue":"Genetics and Molecular Research","topic":"Genetic and phenotypic traits in livestock","field":"Biochemistry, Genetics and Molecular Biology","cited_by":58,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph","funders":"Conselho Nacional de Desenvolvimento Científico e Tecnológico; Colorado State University; University of Queensland; South Dakota State University; Fundação de Amparo à Pesquisa do Estado de São Paulo; Coordenação de Aperfeiçoamento de Pessoal de Nível Superior; University of Wyoming","keywords":"Biology; Single-nucleotide polymorphism; Candidate gene; Genetics; Exon; Gene; Intron; Genotype","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004734595,0.0002201901,0.0003267979,0.0006083191,0.0003075996,0.0004322598,0.0001678932,0.0002921492,0.001218079],"category_scores_gemma":[0.0007685734,0.0001274921,0.0003648023,0.0005983787,0.0001685991,0.0001102174,0.0001662107,0.0002557944,0.0003573813],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001869657,"about_ca_system_score_gemma":0.0001833337,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001758718,"about_ca_topic_score_gemma":0.006643533,"domain_scores_codex":[0.9996015,0.00005810717,0.00002517559,0.0001870836,0.00008914241,0.00003897676],"domain_scores_gemma":[0.9994987,0.0002470213,0.0001470366,0.00002569967,0.00005444356,0.00002706908],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0007860389,0.00005914635,0.246783,0.0005409502,0.0004230555,0.0004503417,0.0005486754,0.001640698,0.7146978,0.0003355655,0.0006728453,0.03306179],"study_design_scores_gemma":[0.00003671007,0.0001848198,0.9363311,0.00006746885,0.0003706663,0.0005874177,0.0002676348,0.005693334,0.0496968,0.0003006666,0.006439016,0.00002441967],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9854617,0.001506231,0.005661805,0.00004333957,0.00002066814,0.00002167866,0.00609652,0.0001161191,0.001071922],"genre_scores_gemma":[0.97404,0.0004658196,0.01231315,0.0001709152,0.0000283834,0.00006179599,0.01167973,0.00004799824,0.00119231],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001758718,"threshold_uncertainty_score":0.004074872,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05637043156028283,"score_gpt":0.3477556335681028,"score_spread":0.29138520200782,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}