{"id":"W2598545405","doi":"10.1093/femspd/ftx032","title":"Infection of porcine colon explants with “Brachyspira hampsonii” leads to increased epithelial necrosis and catarrhal exudate","year":2017,"lang":"en","type":"article","venue":"Pathogens and Disease","topic":"Veterinary medicine and infectious diseases","field":"Veterinary","cited_by":7,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Saskatchewan","funders":"Alberta Livestock and Meat Agency","keywords":"Biology; Microbiology; Lamina propria; Explant culture; Mucus; Exudate; Inoculation; In vitro; In vivo; Epithelium; Immunology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013301,0.0002224586,0.0002995293,0.0001047588,0.0004296401,0.0000816262,0.00008722927,0.00004629106,0.00007584527],"category_scores_gemma":[0.0002343828,0.0001781819,0.00005167511,0.00005366778,0.0001794522,0.0003554154,0.0001394472,0.00006507429,0.00001126944],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001482885,"about_ca_system_score_gemma":0.00007747308,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002132944,"about_ca_topic_score_gemma":0.00008539445,"domain_scores_codex":[0.998943,0.00006054459,0.0002062728,0.0003773906,0.0001667772,0.0002460489],"domain_scores_gemma":[0.9985123,0.00003393356,0.0001558244,0.0004778418,0.00007714886,0.0007430068],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.005459972,0.0003378932,0.9265853,0.0003281236,0.0000435004,0.0008612539,0.0002771584,0.000003235821,0.06121192,0.00003433391,0.0002958759,0.004561449],"study_design_scores_gemma":[0.00184237,0.003261593,0.9924907,0.0001677371,0.0002292276,0.0001978332,0.00003580519,0.0001130829,0.0003618287,0.00007690119,0.0009546919,0.0002682417],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9978878,0.0002355098,0.00007254401,0.0001924283,0.00009591163,0.0003443188,0.0008147187,0.00004763652,0.0003091571],"genre_scores_gemma":[0.9991096,0.0001531952,0.00007817416,0.0002827228,0.0001531557,0.00006201834,0.00007728371,0.00002564908,0.0000582476],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.06590541,"threshold_uncertainty_score":0.7266047,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0402734181226176,"score_gpt":0.30814950836738,"score_spread":0.2678760902447624,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}