{"id":"W2599490367","doi":"10.1186/s13073-017-0421-5","title":"Ethnic and diet-related differences in the healthy infant microbiome","year":2017,"lang":"en","type":"article","venue":"Genome Medicine","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":131,"is_retracted":false,"has_abstract":true,"ca_institutions":"Hamilton Health Sciences; University of British Columbia; Hospital for Sick Children; BC Children's Hospital; Child and Family Research Institute; SickKids Foundation; University of Toronto; Population Health Research Institute; University of Alberta; University of Manitoba; Impact; McMaster University","funders":"Canadian Institutes of Health Research; Indian Council of Medical Research; McMaster University; Heart and Stroke Foundation of Canada","keywords":"Breastfeeding; Ethnic group; Microbiome; Gut flora; Clinical nutrition; Medicine; Pregnancy; Birth weight; Demography; Physiology; Biology; Immunology; Pediatrics; Internal medicine; Bioinformatics; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004943088,0.0001158333,0.0001881831,0.0000445256,0.0002266233,0.00001542969,0.0003243328,0.0001093502,0.00002793235],"category_scores_gemma":[0.00006150342,0.00006912088,0.00002037208,0.00004641182,0.0003299103,0.000002287762,0.0001005813,0.0001496097,0.000007206264],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000008300564,"about_ca_system_score_gemma":0.00004342975,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003701872,"about_ca_topic_score_gemma":0.0003986709,"domain_scores_codex":[0.9991612,0.00006681305,0.0002117214,0.0002449036,0.00006222712,0.0002530882],"domain_scores_gemma":[0.9993167,0.00001383258,0.0001120147,0.0004699614,0.00002021514,0.000067299],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001345383,0.00004203019,0.02432189,0.00007071388,0.00002369358,0.00001065915,0.002130531,1.332495e-7,0.970574,0.00008777192,0.0009336019,0.001670482],"study_design_scores_gemma":[0.001180787,0.0009333742,0.978334,0.0000342682,0.00001110406,0.00004027199,0.000311437,0.000002028431,0.0002195355,0.00007411803,0.01875731,0.000101811],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9783923,0.01023432,0.000008503048,0.01023762,0.0001582625,0.0002207945,0.000008226561,0.000003748508,0.0007362431],"genre_scores_gemma":[0.9937415,0.003793477,0.00002447618,0.001905998,0.0001738613,0.000008690803,0.00005425037,0.000007761115,0.0002899985],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9703544,"threshold_uncertainty_score":0.2818668,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03264555806417185,"score_gpt":0.3157137020887952,"score_spread":0.2830681440246233,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}