{"id":"W2600385721","doi":"10.1002/ecs2.1684","title":"Can existing data on West Nile virus infection in birds and mosquitos explain strain replacement?","year":2017,"lang":"en","type":"article","venue":"Ecosphere","topic":"Mosquito-borne diseases and control","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":true,"ca_institutions":"McMaster University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Transmission (telecommunications); Virology; Arbovirus; Pathogen; Dominance (genetics); Zoology; Competition (biology); Genotype; Clade; Virus; Demography; Ecology; Immunology; Phylogenetic tree; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0003050308,0.000156221,0.0002388127,0.00002515627,0.0002408728,0.0001460735,0.0001861653,0.0000749788,0.0009272498],"category_scores_gemma":[0.0004266629,0.0001461001,0.00003159159,0.00004155258,0.0000415466,0.0001788954,0.0001660949,0.0001836617,0.00005488305],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00006769629,"about_ca_system_score_gemma":0.00008169404,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.007109453,"about_ca_topic_score_gemma":0.03261304,"domain_scores_codex":[0.9988362,0.00003640946,0.0002279128,0.0004668418,0.0001716064,0.00026105],"domain_scores_gemma":[0.9983758,0.00004199412,0.0001451016,0.001259175,0.00002423929,0.0001537255],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001631109,0.0008885282,0.6336278,0.0004347806,0.0001709901,0.0004580392,0.0004915092,0.00006667239,0.004979584,0.001445489,0.06214905,0.2936564],"study_design_scores_gemma":[0.005797639,0.0007134356,0.9573922,0.0005033051,0.0001170886,0.00002317998,0.0003899562,0.01121707,0.0003148706,0.0002254663,0.02297756,0.0003282651],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9731601,0.0002701311,0.00001811318,0.0010233,0.0002165656,0.0004197989,0.0002377317,0.00005134141,0.0246029],"genre_scores_gemma":[0.9975255,0.0001461354,0.00007166918,0.0003488559,0.0003516859,0.00003840834,0.0001586335,0.00002706534,0.001332051],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3237643,"threshold_uncertainty_score":0.9999861,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04939359402837234,"score_gpt":0.3317867244107511,"score_spread":0.2823931303823787,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}