{"id":"W2600997638","doi":"10.1200/jco.2013.31.15_suppl.8096","title":"Canadian ALK (CALK): A pan-Canadian multicenter study to optimize and standardize ALK immunohistochemistry (IHC) and fluorescence in situ hybridization (FISH) for <i>ALK</i> gene rearrangements.","year":2013,"lang":"en","type":"article","venue":"Journal of Clinical Oncology","topic":"Lung Cancer Treatments and Mutations","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"ca_institutions":"McMaster University; Princess Margaret Cancer Centre; Centre Hospitalier de l’Université de Montréal; Health Sciences North; University of British Columbia; Ottawa Hospital; University Health Network; McMaster University Medical Centre; Health Sciences Centre; University of Ottawa; McGill University; McGill University Health Centre; BC Cancer Agency; Queen Elizabeth II Health Sciences Centre; University of Toronto; Dalhousie University; Jewish General Hospital","funders":"","keywords":"Immunohistochemistry; Fluorescence in situ hybridization; Medicine; Fish <Actinopterygii>; Context (archaeology); Crizotinib; Lung cancer; Pathology; Oncology; Internal medicine; Biology; Gene; Genetics; Fishery","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.004359156,0.001251436,0.0007784246,0.001112798,0.003816071,0.0009597501,0.001419713,0.001036523,0.002889908],"category_scores_gemma":[0.003777737,0.0006704096,0.0009042344,0.002959231,0.001123244,0.0006296716,0.001440843,0.0007539478,0.0005640913],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.03064196,"about_ca_system_score_gemma":0.05501837,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.9244065,"about_ca_topic_score_gemma":0.9261507,"domain_scores_codex":[0.9979511,0.0003802708,0.00008009536,0.0003837687,0.0006369103,0.0005678547],"domain_scores_gemma":[0.9945393,0.0002052617,0.0005815875,0.00025951,0.002623764,0.001790581],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.01799542,0.004061353,0.8384175,0.001302495,0.001003391,0.00126448,0.00264657,0.001845997,0.01304146,0.002274434,0.03346762,0.08267929],"study_design_scores_gemma":[0.003744758,0.004828599,0.9613791,0.0001447964,0.000556728,0.0009086354,0.001898515,0.001160995,0.001044405,0.0001796162,0.02402738,0.0001265071],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9681388,0.001794819,0.00148207,0.001832384,0.0001219938,0.006595763,0.01395474,0.0001160712,0.005963454],"genre_scores_gemma":[0.9738765,0.001211356,0.008202195,0.001469953,0.00009438809,0.002894062,0.008677603,0.00005515752,0.003518838],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.07559353,"threshold_uncertainty_score":0.222324,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03625839351098122,"score_gpt":0.4253426449634531,"score_spread":0.3890842514524719,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}