{"id":"W2601275109","doi":"10.1016/j.jmoldx.2017.01.007","title":"Comprehensive Determination of Prostate Tumor ETS Gene Status in Clinical Samples Using the CLIA Decipher Assay","year":2017,"lang":"en","type":"article","venue":"Journal of Molecular Diagnostics","topic":"Prostate Cancer Treatment and Research","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":false,"ca_institutions":"Genome British Columbia","funders":"National Cancer Institute; Research Institute for Sustainable Humanosphere, Kyoto University","keywords":"DECIPHER; Computational biology; Prostate; Biology; Cancer research; Bioinformatics; Genetics; Cancer","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001233679,0.0005674869,0.0006112177,0.002182017,0.0003650826,0.0008896306,0.0005683795,0.0006712203,0.00184506],"category_scores_gemma":[0.001626076,0.0003873118,0.0004724919,0.0009613247,0.0004315233,0.0003311934,0.0008061012,0.0008862388,0.0009296564],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003377552,"about_ca_system_score_gemma":0.0005276366,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005833163,"about_ca_topic_score_gemma":0.001753784,"domain_scores_codex":[0.9987244,0.0001998129,0.00009342039,0.0003759873,0.0004333898,0.0001729674],"domain_scores_gemma":[0.9990314,0.0003733646,0.0001500294,0.0001700067,0.0002070175,0.00006817701],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.001850383,0.0002312429,0.3010995,0.0003990416,0.0002734669,0.0006004448,0.000350455,0.001834802,0.6149954,0.0009761556,0.003172322,0.07421681],"study_design_scores_gemma":[0.0001142276,0.001012697,0.3630682,0.00009968476,0.0004105533,0.005288218,0.000302349,0.0135056,0.596415,0.001540898,0.01816948,0.00007313996],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9438949,0.003678537,0.03205376,0.000523104,0.0000843493,0.0002524452,0.01229498,0.001214863,0.006003062],"genre_scores_gemma":[0.940074,0.001037696,0.03930999,0.0008488328,0.00005493352,0.0003774458,0.01310062,0.0001180694,0.005078456],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002182017,"threshold_uncertainty_score":0.006524384,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.09526507109589125,"score_gpt":0.4264819817657359,"score_spread":0.3312169106698447,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}