{"id":"W2601316604","doi":"10.1016/j.humimm.2017.03.009","title":"HLA-A, B, DRB1, DQA1, DQB1 alleles and haplotype frequencies in Dene and Cree cohorts in Manitoba, Canada","year":2017,"lang":"en","type":"article","venue":"Human Immunology","topic":"Tuberculosis Research and Epidemiology","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":false,"ca_institutions":"Canadian Blood Services; Diagnostic Services Manitoba; Health Sciences Centre; University of Manitoba","funders":"National Sanitarium Association","keywords":"Haplotype; Allele; Human leukocyte antigen; Genetics; Allele frequency; Biology; Gene; Antigen","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003877287,0.0001546309,0.0005426696,0.0001830929,0.0002228198,0.00002472173,0.0001824504,0.0001783725,0.00009438267],"category_scores_gemma":[0.0007487182,0.0001400789,0.0000200664,0.0000350208,0.0006107479,0.00008468235,0.0002116723,0.0004205043,0.000006169274],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001804768,"about_ca_system_score_gemma":0.0002182301,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.8214142,"about_ca_topic_score_gemma":0.9844035,"domain_scores_codex":[0.9985837,0.0001495896,0.0003097508,0.0003326509,0.0001015949,0.0005227295],"domain_scores_gemma":[0.9991378,0.0001569879,0.00008405639,0.0004770025,0.00004231278,0.0001018821],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001236177,0.00003918861,0.9817429,0.00003696424,0.00007450523,0.0005995214,0.0001202846,6.837155e-7,0.01130117,0.001177044,0.002133098,0.002651078],"study_design_scores_gemma":[0.001401668,0.0002428454,0.9895505,0.00005979325,0.00001169104,0.0001830723,0.0002940783,0.00002182588,0.0002193779,0.0008414423,0.007054368,0.0001193357],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9872457,0.006202124,7.790097e-7,0.004075853,0.00008076084,0.000243864,0.000005781152,0.00001292833,0.002132188],"genre_scores_gemma":[0.9970279,0.001876889,0.00008843692,0.0004871773,0.0000496714,0.000033969,0.00002025329,0.00001548838,0.0004001588],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1629893,"threshold_uncertainty_score":0.571225,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04941485066006741,"score_gpt":0.3102607312206463,"score_spread":0.2608458805605789,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}