{"id":"W2602104031","doi":"10.1097/md.0000000000005821","title":"Oral microbiome in HIV-associated periodontitis","year":2017,"lang":"en","type":"article","venue":"Medicine","topic":"HIV/AIDS oral health manifestations","field":"Medicine","cited_by":62,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; University of Victoria; Instituto de Salud Carlos III; Center for AIDS Research, University of Washington; European Regional Development Fund; Emory University; Styrelsen för Internationellt Utvecklingssamarbete","keywords":"Microbiome; Oral Microbiome; Medicine; Saliva; Dysbiosis; Neisseria; UniFrac; Immunology; Microbiology; Internal medicine; Biology; Bioinformatics; Bacteria; Genetics; 16S ribosomal RNA","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002754327,0.0001527685,0.0001929291,0.0004120256,0.0005676194,0.0007584875,0.0001112916,0.0004145101,0.001360848],"category_scores_gemma":[0.000596024,0.0001743702,0.0001515548,0.0005243993,0.0001707894,0.0003035328,0.0006234649,0.000286223,0.0001536582],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001667092,"about_ca_system_score_gemma":0.0002095266,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001779096,"about_ca_topic_score_gemma":0.002257509,"domain_scores_codex":[0.9998364,0.00004594843,0.00001359119,0.00004097556,0.00003471056,0.00002833247],"domain_scores_gemma":[0.9999105,0.0000161557,0.00003288028,0.000005261913,0.00001648844,0.0000187889],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0008957675,0.0001380841,0.9077982,0.0003259232,0.0001238758,0.001087691,0.001531149,0.0001769511,0.03316378,0.0002226725,0.0007001162,0.05383576],"study_design_scores_gemma":[0.000008578501,0.0002253476,0.9928936,0.0001161065,0.00006530248,0.001855422,0.001423272,0.0003577545,0.0008716565,0.0002590452,0.001914026,0.000009731131],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9941685,0.004525019,0.0001674373,0.00007969906,0.00001033144,0.00001754301,0.0002637935,0.000004774543,0.0007628928],"genre_scores_gemma":[0.9961371,0.002236981,0.0006599267,0.000123426,0.00001446216,0.00002598524,0.0003851901,0.000002331454,0.000414493],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001779096,"threshold_uncertainty_score":0.004552424,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04644658182757085,"score_gpt":0.3780482702962372,"score_spread":0.3316016884686664,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}