{"id":"W2603047754","doi":"10.1371/journal.pgen.1006705","title":"Salmonella genomic island 1 (SGI1) reshapes the mating apparatus of IncC conjugative plasmids to promote self-propagation","year":2017,"lang":"en","type":"article","venue":"PLoS Genetics","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":58,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Sherbrooke","funders":"Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs","keywords":"Genomic island; Plasmid; Biology; Genetics; Gene; Mutant; Salmonella; Mobile genetic elements; Bacteria","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002097733,0.0008091427,0.0003961654,0.0006164687,0.0001571715,0.0002369854,0.0003788686,0.0003705989,0.001812998],"category_scores_gemma":[0.0001845991,0.0002700404,0.0004400069,0.0003452147,0.0002493542,0.0001228027,0.0005762173,0.001041193,0.001522575],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003289563,"about_ca_system_score_gemma":0.0002427688,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004834519,"about_ca_topic_score_gemma":0.001018566,"domain_scores_codex":[0.9997707,0.00004288775,0.00002440656,0.00004738968,0.00006745446,0.00004709583],"domain_scores_gemma":[0.9997594,0.00004454142,0.0000808063,0.0000441894,0.00001808031,0.00005299811],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00004712913,0.0000575363,0.0002751141,0.00004764113,0.000006630195,0.00005401949,0.00002064684,0.00003948093,0.9968822,0.0001466939,0.0001072535,0.002315625],"study_design_scores_gemma":[0.00002502396,0.0007500167,0.009332173,0.0000218226,0.00003316659,0.001039288,0.0000531971,0.001054378,0.9766995,0.00008365687,0.01089455,0.00001326256],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9793012,0.001535453,0.01377145,0.0001818477,0.00009560355,0.0002262976,0.001646471,0.0006308914,0.002610643],"genre_scores_gemma":[0.9627275,0.0009004566,0.01916319,0.0001295437,0.0000180554,0.0001850778,0.006941865,0.0001932162,0.0097411],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001812998,"threshold_uncertainty_score":0.006065071,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03664584856937133,"score_gpt":0.2555215047225287,"score_spread":0.2188756561531574,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}