{"id":"W2604427370","doi":"10.1101/112425","title":"Generation and comparative analysis of full-length transcriptomes in sweetpotato and its putative wild ancestor <i>I. trifida</i>","year":2017,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":12,"is_retracted":false,"has_abstract":true,"ca_institutions":"Ministry of Agriculture","funders":"Priority Academic Program Development of Jiangsu Higher Education Institutions; National Key Laboratory of Plant Molecular Genetics; Natural Science Foundation of Jiangsu Province; Government of Jiangsu Province","keywords":"Biology; Genetics; Intron; Genome; Contig; Gene; Functional genomics; Exon; Genomics; Complementary DNA; DNA sequencing; Expressed sequence tag; Computational biology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001965165,0.0003245423,0.0003710229,0.0004174429,0.0002873986,0.0003083054,0.000193574,0.0002354546,0.0009395003],"category_scores_gemma":[0.0002235866,0.0001840418,0.000620813,0.0003846298,0.0001342147,0.0002697514,0.0003577039,0.00048884,0.000453745],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001629729,"about_ca_system_score_gemma":0.0002101879,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005084763,"about_ca_topic_score_gemma":0.0009750546,"domain_scores_codex":[0.999879,0.000008755811,0.00001293993,0.00005250252,0.00002451734,0.00002216462],"domain_scores_gemma":[0.9998009,0.00004732869,0.000051392,0.00001923764,0.00004127176,0.00004000524],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0000673262,0.000008951138,0.0007592303,0.00004004718,0.000006071158,0.00004343185,0.00003921036,0.00003892174,0.9976242,0.00002556438,0.00004421466,0.001302777],"study_design_scores_gemma":[0.00006144353,0.001032102,0.4625132,0.00008869269,0.0003132468,0.002574456,0.0009233162,0.01073727,0.5019939,0.0003630686,0.01930988,0.00008944399],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9843737,0.0005007048,0.006120879,0.00005617549,0.0000266617,0.00004526035,0.007885217,0.0001427798,0.000848708],"genre_scores_gemma":[0.8854766,0.0008618039,0.02454412,0.0002461668,0.00002930014,0.0002061058,0.08599173,0.0002739054,0.002370192],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0009395003,"threshold_uncertainty_score":0.003142893,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.09255210156796123,"score_gpt":0.2892359918197359,"score_spread":0.1966838902517746,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}