{"id":"W2604455965","doi":"10.1128/jcm.02488-16","title":"Novel Multiplex PCR Assay for Detection of Chlorhexidine-Quaternary Ammonium, Mupirocin, and Methicillin Resistance Genes, with Simultaneous Discrimination of Staphylococcus aureus from Coagulase-Negative Staphylococci","year":2017,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Antimicrobial Resistance in Staphylococcus","field":"Medicine","cited_by":32,"is_retracted":false,"has_abstract":true,"ca_institutions":"Calgary Laboratory Services; University of Calgary; Alberta Health Services","funders":"Agency for Healthcare Research and Quality; Alberta Health Services","keywords":"Mupirocin; Microbiology; Staphylococcus aureus; Methicillin-resistant Staphylococcus aureus; Coagulase; Staphylococcus; Antiseptic; Staphylococcal infections; Chlorhexidine; Biology; Antibiotic resistance; Multiplex polymerase chain reaction; Medicine; Antibiotics; Bacteria; Polymerase chain reaction; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00203856,0.0003887482,0.002054811,0.0002232035,0.0002059539,0.00002798401,0.000461145,0.0006106107,0.00001077897],"category_scores_gemma":[0.008249516,0.0002865871,0.0005079984,0.0001090738,0.001657722,0.0001856501,0.0001162026,0.0007923842,8.240647e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00009219812,"about_ca_system_score_gemma":0.0003612305,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003097174,"about_ca_topic_score_gemma":0.001929282,"domain_scores_codex":[0.995908,0.0003166771,0.002625131,0.0005385816,0.0002275767,0.000384034],"domain_scores_gemma":[0.9852012,0.005993974,0.0057436,0.0006600724,0.002181398,0.0002197335],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.02728515,0.0006028181,0.0179385,0.0003587462,0.0008071185,0.00005081622,0.0002047047,0.00009588025,0.9464951,0.00003183946,0.00009055693,0.006038826],"study_design_scores_gemma":[0.01468108,0.004554995,0.07607874,0.001422425,0.001018202,0.00005372455,0.0004146419,0.000612351,0.8977619,0.0004719061,0.002525879,0.0004041923],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9497951,0.001084535,0.04625054,0.0005872134,0.0004855862,0.0009268115,0.0008249384,0.00001138616,0.00003384929],"genre_scores_gemma":[0.963537,0.0006620634,0.03505505,0.0001230362,0.0003965201,0.00001055933,0.00002940831,0.00005177677,0.0001345218],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.05814024,"threshold_uncertainty_score":0.9999586,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05773191293180056,"score_gpt":0.3614302465487964,"score_spread":0.3036983336169958,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}