{"id":"W2604862741","doi":"10.1002/gcc.22460","title":"Genome‐wide copy number variation pattern analysis and a classification signature for non‐small cell lung cancer","year":2017,"lang":"en","type":"article","venue":"Genes Chromosomes and Cancer","topic":"Genomic variations and chromosomal abnormalities","field":"Biochemistry, Genetics and Molecular Biology","cited_by":79,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"National Cancer Institute; BC Cancer Agency; National Natural Science Foundation of China","keywords":"Copy-number variation; Adenocarcinoma; Lung cancer; Lung; Carcinoma; Biology; Oncology; Pathology; Medicine; Cancer; Genome; Gene; Internal medicine; Genetics","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001084469,0.0001862726,0.0002140812,0.00003677261,0.0004459,0.0001710901,0.0001497934,0.0001770661,0.0001436547],"category_scores_gemma":[0.000009359899,0.0001736718,0.00009925898,0.0000498332,0.00005995964,0.00001566966,0.00009770313,0.00005348804,0.000001128873],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004027956,"about_ca_system_score_gemma":0.0001147002,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006487687,"about_ca_topic_score_gemma":0.001523948,"domain_scores_codex":[0.9990358,0.00001912416,0.0001882351,0.000441077,0.00008850099,0.0002271994],"domain_scores_gemma":[0.9991552,0.00001168723,0.0002314883,0.0003548557,0.0001670321,0.00007978298],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00004487348,0.00003650091,0.7290169,0.0002303937,0.0006848936,7.717367e-7,0.0004515524,0.0002316096,0.2559569,0.00002030563,0.0004001699,0.01292508],"study_design_scores_gemma":[0.001065237,0.00006387833,0.918943,0.000020994,0.0009357027,0.000002751426,0.000165318,0.001953207,0.05657495,0.00004358463,0.01981424,0.0004171091],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9816817,0.0064727,0.01019958,0.0004201293,0.0001766492,0.000340605,0.0004826995,0.000007237857,0.0002187118],"genre_scores_gemma":[0.9870759,0.009177138,0.0003433272,0.0002033682,0.0004409734,0.0003973595,0.0002533486,0.00002304999,0.002085496],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.199382,"threshold_uncertainty_score":0.7082132,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009598216775049124,"score_gpt":0.2553226428092248,"score_spread":0.2457244260341757,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}