{"id":"W2604886469","doi":"10.1080/20002297.2017.1385369","title":"A dysbiotic mycobiome dominated by <i>Candida albicans</i> is identified within oral squamous-cell carcinomas","year":2017,"lang":"en","type":"article","venue":"Journal of Oral Microbiology","topic":"Oral Health Pathology and Treatment","field":"Dentistry","cited_by":107,"is_retracted":false,"has_abstract":true,"ca_institutions":"McMaster University; St. Joseph’s Healthcare Hamilton","funders":"University of Peradeniya; Australian Research Council; Griffith University","keywords":"Malassezia; Biology; Microbiology; Basidiomycota; Candida albicans; Ascomycota; Alternaria; Internal transcribed spacer; Corpus albicans; Botany; Genetics; Gene; Phylogenetic tree","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001512863,0.0002430838,0.0002725345,0.001158215,0.0002992538,0.0006707026,0.000150383,0.0003003173,0.001039146],"category_scores_gemma":[0.0003746529,0.00013189,0.0001924898,0.0007850403,0.0002401148,0.0002171167,0.0003283889,0.0001907679,0.0002446351],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001259462,"about_ca_system_score_gemma":0.0001413743,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001068659,"about_ca_topic_score_gemma":0.001444138,"domain_scores_codex":[0.9997492,0.00002130542,0.00003175325,0.00007466311,0.00007435345,0.00004873419],"domain_scores_gemma":[0.9996933,0.00004144607,0.000141214,0.00002109353,0.00006091904,0.00004207065],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0005063411,0.0000445764,0.4848997,0.0003359987,0.00009577593,0.001272792,0.0002845496,0.000081463,0.4895117,0.00008006179,0.0002032734,0.02268376],"study_design_scores_gemma":[0.000005084878,0.0001688991,0.9573112,0.00004958021,0.0001303651,0.004193037,0.0007190636,0.0002636778,0.03500693,0.00009264023,0.002048586,0.00001097463],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9963898,0.00232648,0.0004205476,0.00002308767,0.000008375807,0.00001196862,0.0002335326,0.00001709098,0.0005689813],"genre_scores_gemma":[0.9979604,0.0007182001,0.0007318023,0.00003237385,0.00001258924,0.00000846682,0.0002940296,0.000007495802,0.0002346246],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001158215,"threshold_uncertainty_score":0.003476322,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02003410049716633,"score_gpt":0.3045584317735997,"score_spread":0.2845243312764334,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}