{"id":"W2605098532","doi":"10.1158/1557-3125.dnarepair16-ia11","title":"Abstract IA11: Signatures of mutational processes in human cancer","year":2017,"lang":"en","type":"article","venue":"Molecular Cancer Research","topic":"Cancer Genomics and Diagnostics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"","keywords":"Cancer; APOBEC; Biology; Genetics; DNA repair; Somatic cell; Cancer research; DNA mismatch repair; DNA; DNA damage; Colorectal cancer; Cancer cell; Mutation; Genome; Gene","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003429161,0.0001179558,0.0001492814,0.0001115938,0.0002114492,0.00007969401,0.0005454517,0.0001338634,0.0001042057],"category_scores_gemma":[0.0004290162,0.0001221131,0.00005525592,0.0001062396,0.0002840499,0.000006691763,0.0002311135,0.0002267672,0.000001816198],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000624864,"about_ca_system_score_gemma":0.0008392202,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.004737431,"about_ca_topic_score_gemma":0.006241631,"domain_scores_codex":[0.9986687,0.00003512979,0.000204896,0.0003618186,0.0003895729,0.000339907],"domain_scores_gemma":[0.9988145,0.00002904073,0.000115747,0.0004927809,0.0004718199,0.00007607429],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00009536326,0.00008530387,0.01123277,0.0001711873,0.00004546349,0.00003894942,0.00007072873,0.002070311,0.9822571,0.0003634053,0.001178593,0.002390882],"study_design_scores_gemma":[0.000703728,0.000102683,0.07131334,0.0001227738,0.000006698283,9.056643e-7,0.00003571787,0.00001534249,0.919979,0.0007664112,0.006779247,0.0001741343],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9880773,0.008550668,0.0000334594,0.0005045318,0.00008494413,0.0002507909,0.0001259193,0.000002710637,0.002369632],"genre_scores_gemma":[0.9976902,0.00150374,0.00006133904,0.00008292098,0.0001837265,0.000222429,0.00004864717,0.00002755054,0.0001794613],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.06227802,"threshold_uncertainty_score":0.7161611,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04622078580571803,"score_gpt":0.4176241131155222,"score_spread":0.3714033273098041,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}