{"id":"W2605148751","doi":"10.1128/mbio.00321-17","title":"Catabolism of the Last Two Steroid Rings in <i>Mycobacterium tuberculosis</i> and Other Bacteria","year":2017,"lang":"en","type":"article","venue":"mBio","topic":"Steroid Chemistry and Biochemistry","field":"Biochemistry, Genetics and Molecular Biology","cited_by":88,"is_retracted":false,"has_abstract":true,"ca_institutions":"Queen's University; University of British Columbia","funders":"Canadian Institutes of Health Research","keywords":"Acetyl-CoA; Biochemistry; Mycobacterium smegmatis; Catabolism; Coenzyme A; Mycobacterium tuberculosis; Bacteria; Rhodococcus; Thiolase; Mutant; Mycobacterium; Chemistry; Steroid; Microbiology; Reductase; Biology; Enzyme; Gene; Peroxisome; Tuberculosis; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008864549,0.000134811,0.0001293763,0.000007351759,0.00008971588,0.00004690497,0.0003679078,0.0001212054,0.00001461689],"category_scores_gemma":[0.00003996084,0.000104613,0.00005371734,0.00001920076,0.000177041,0.000004825434,0.0003543137,0.00008541805,0.000001521375],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000005826206,"about_ca_system_score_gemma":0.00002142375,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00009220775,"about_ca_topic_score_gemma":0.0001129715,"domain_scores_codex":[0.9993206,0.00001687687,0.0001598379,0.0002608599,0.00006959029,0.0001722639],"domain_scores_gemma":[0.9990829,0.000003622702,0.0001324383,0.0007128216,0.00002436933,0.00004383384],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00003000038,0.0000258216,0.1060665,0.00004106668,0.00001304344,6.700201e-7,0.00003403409,1.894515e-7,0.8933669,0.000003672239,0.0001800774,0.0002381002],"study_design_scores_gemma":[0.000568069,0.00001372208,0.1307283,0.0000393178,0.000008656944,0.0000178353,0.00002023562,0.000001058153,0.8548609,0.0000104172,0.0136209,0.0001105676],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9973963,0.0002099965,0.00000150754,0.0001728828,0.0001445525,0.00006766438,0.00006375278,0.000003274709,0.00194002],"genre_scores_gemma":[0.9989628,0.00003896662,0.00003731733,0.0002085604,0.0002071488,0.000007744328,0.00001430679,0.00001332953,0.0005097982],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.03850599,"threshold_uncertainty_score":0.4265993,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.00700852445209074,"score_gpt":0.2365316413426684,"score_spread":0.2295231168905776,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}