{"id":"W2605460970","doi":"10.1038/srep46203","title":"Genetic architecture of gene expression underlying variation in host response to porcine reproductive and respiratory syndrome virus infection","year":2017,"lang":"en","type":"article","venue":"Scientific Reports","topic":"Animal Virus Infections Studies","field":"Agricultural and Biological Sciences","cited_by":36,"is_retracted":false,"has_abstract":true,"ca_institutions":"Ontario Power Generation; University of Alberta","funders":"Alberta Livestock and Meat Agency; Western Canada Research Grid; Compute Canada; Agricultural Research Service; Genome Canada; Genome Alberta; U.S. Department of Agriculture","keywords":"Expression quantitative trait loci; Biology; Porcine reproductive and respiratory syndrome virus; Viremia; Genetic architecture; Gene; Genetic variation; Genotype; Gene expression; Quantitative trait locus; Genetics; Virus; Phenotype; Virology; Immunology; Single-nucleotide polymorphism","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003975105,0.0001511581,0.0003098161,0.0005806449,0.0001412263,0.0003308895,0.0001753333,0.0002905265,0.0007477265],"category_scores_gemma":[0.0003789548,0.0002153743,0.00041597,0.0005084492,0.0002843607,0.0001156549,0.0003014918,0.0004698079,0.0001413402],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002084162,"about_ca_system_score_gemma":0.0001496415,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001109978,"about_ca_topic_score_gemma":0.00175764,"domain_scores_codex":[0.9995146,0.00008925578,0.00002584139,0.0002328122,0.00006792022,0.00006954364],"domain_scores_gemma":[0.9996248,0.0001557379,0.0001048642,0.00003473831,0.00003507821,0.00004479911],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0005295176,0.00004869394,0.1062746,0.00005170617,0.0001892309,0.0001586641,0.0002712014,0.0005013037,0.8883797,0.0001437072,0.00006545785,0.003386199],"study_design_scores_gemma":[0.000006117472,0.00008861397,0.9935375,0.000003600638,0.00003481317,0.0001136299,0.00006573253,0.000941342,0.004986152,0.00007994313,0.0001327934,0.000009709362],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9985177,0.00008854359,0.000749419,0.00001384863,0.000003111234,0.000005846369,0.0004221452,0.0000104385,0.0001890371],"genre_scores_gemma":[0.9980564,0.00005290092,0.0007377338,0.00004443838,0.000003105781,0.0000155824,0.0007349659,0.00001664227,0.0003382941],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001109978,"threshold_uncertainty_score":0.002501428,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0431839050834154,"score_gpt":0.2781415843004569,"score_spread":0.2349576792170415,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}