{"id":"W2605576596","doi":"10.1099/jgv.0.000740","title":"ICTV Virus Taxonomy Profile: Potyviridae","year":2017,"lang":"en","type":"article","venue":"Journal of General Virology","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":503,"is_retracted":false,"has_abstract":true,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"Wellcome Trust","keywords":"Potyviridae; Biology; Genome; Virology; Plant virus; Virus classification; Taxonomy (biology); Phylogenetics; Potyvirus; Virus; Genetics; Botany; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000374935,0.000121037,0.0003068484,0.00002313895,0.0005485402,0.00009730804,0.0007669858,0.00009814845,0.0004983608],"category_scores_gemma":[0.0002748107,0.00004105084,0.0001363898,0.00004216907,0.0002087269,0.0002375534,0.000232165,0.0002842479,0.0000689885],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000260063,"about_ca_system_score_gemma":0.0000206224,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002055904,"about_ca_topic_score_gemma":0.0004122191,"domain_scores_codex":[0.9988531,0.0001132583,0.0003050288,0.0001425596,0.0002400935,0.0003459577],"domain_scores_gemma":[0.9990516,0.0001065781,0.0004771774,0.00008646266,0.0001369318,0.0001412761],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001443576,0.00005166509,0.004772232,0.000001645191,0.00005252442,0.0001567438,0.000007238588,0.000003013519,0.9375211,0.00007567958,0.02827755,0.02893622],"study_design_scores_gemma":[0.0003345159,0.0009622107,0.5705462,0.000008086326,0.0000179575,0.0002691462,0.00001632868,0.00004047158,0.03073492,0.0003293362,0.3965954,0.0001454321],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9910207,0.0003536435,0.000003929028,0.005144445,0.0003433426,0.0001094712,0.00008406821,0.000007835541,0.002932551],"genre_scores_gemma":[0.9953831,0.0006576272,0.0003814122,0.0005079746,0.001754969,0.00001144851,0.000005482256,9.603978e-7,0.001297043],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9067862,"threshold_uncertainty_score":0.5456701,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.07400764631459786,"score_gpt":0.2890705437436055,"score_spread":0.2150628974290077,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}