{"id":"W2605721875","doi":"10.1111/tpj.13582","title":"Sequencing and functional validation of the <scp>JGI </scp><i>Brachypodium distachyon</i> T‐<scp>DNA</scp> collection","year":2017,"lang":"en","type":"article","venue":"The Plant Journal","topic":"Plant Disease Resistance and Genetics","field":"Agricultural and Biological Sciences","cited_by":43,"is_retracted":false,"has_abstract":true,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"U.S. Department of Energy; Biological and Environmental Research; Office of Science; National Science Foundation","keywords":"Brachypodium distachyon; Biology; Brachypodium; Functional genomics; Gene; genomic DNA; Genome; Genetics; Genomics; Genomic library; Computational biology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001658482,0.0009007852,0.0009135111,0.00113282,0.0009136599,0.001050076,0.0009162796,0.0005579341,0.00122304],"category_scores_gemma":[0.002054144,0.0003997754,0.00105658,0.002181247,0.0005903966,0.0002715075,0.0007573334,0.001267351,0.001885064],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0008971607,"about_ca_system_score_gemma":0.001845145,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01154165,"about_ca_topic_score_gemma":0.01190474,"domain_scores_codex":[0.9989727,0.000133449,0.0001110419,0.0002151041,0.0004040649,0.0001637305],"domain_scores_gemma":[0.9980094,0.0004014267,0.0002963398,0.0002661827,0.0006137733,0.0004128873],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001294843,0.00005490903,0.001125485,0.0001171917,0.00001728129,0.0001993573,0.0002146622,0.0002522325,0.9936619,0.0001692532,0.000372211,0.003686012],"study_design_scores_gemma":[0.000222391,0.0009755553,0.09319165,0.0001238814,0.0004265236,0.001572062,0.0006578129,0.004801925,0.8444255,0.0003183463,0.05316482,0.0001195505],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9019902,0.0007370205,0.03658338,0.0003100981,0.0001734104,0.0009971154,0.05234444,0.0009723874,0.00589199],"genre_scores_gemma":[0.5787547,0.001373945,0.09459353,0.0008137968,0.0001050576,0.001057798,0.3116561,0.00244309,0.009201963],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01154165,"threshold_uncertainty_score":0.02294892,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03258263232791316,"score_gpt":0.2058644311343656,"score_spread":0.1732817988064524,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}