{"id":"W2606279906","doi":"10.1016/j.syapm.2017.03.004","title":"Understanding aerobic/anaerobic metabolism in Caldibacillus debilis through a comparison with model organisms","year":2017,"lang":"en","type":"article","venue":"Systematic and Applied Microbiology","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":12,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of Manitoba","funders":"Natural Sciences and Engineering Research Council of Canada; Genome Canada","keywords":"Biology; Biochemistry; Proteome; Fermentation; Escherichia coli; Thermophile; Metabolic pathway; Methylobacterium; Anaerobic exercise; Metabolism; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001646462,0.0002690785,0.0007944956,0.00003650724,0.0004087046,0.00007271848,0.0003642282,0.0002222426,0.00002625925],"category_scores_gemma":[0.00001507955,0.0002037392,0.000037809,0.00005072202,0.0003043045,0.00007742859,0.0001476117,0.0002447327,0.000008295126],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001250698,"about_ca_system_score_gemma":0.00003705679,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003896552,"about_ca_topic_score_gemma":0.000120959,"domain_scores_codex":[0.9986471,0.00001628478,0.0004990831,0.0004531704,0.00004613467,0.0003382303],"domain_scores_gemma":[0.9986778,0.00006107437,0.0004561578,0.000729778,0.00002310764,0.00005208748],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00004042714,0.00006029898,0.000108612,0.003658864,0.0000602274,0.000002360159,0.0009330788,0.0005380524,0.8071364,0.1873888,0.00006034487,0.00001250028],"study_design_scores_gemma":[0.005748637,0.00007725872,0.00002416979,0.005363993,0.0004813505,0.0003935871,0.009090257,0.008164071,0.8488558,0.119373,0.0003318424,0.002095975],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"methods","genre_gemma":"empirical","genre_scores_codex":[0.3359534,0.0003526006,0.652662,0.0002054499,0.00002531324,0.001394168,0.00004947326,0.0001604722,0.009197148],"genre_scores_gemma":[0.9433969,0.00003206311,0.05586599,0.00005793473,0.00001730574,0.0003992083,0.0000274704,0.00003267981,0.0001704852],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.6074435,"threshold_uncertainty_score":0.8308241,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05606850860562298,"score_gpt":0.277712400997781,"score_spread":0.221643892392158,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}