{"id":"W2608301083","doi":"10.3389/fcimb.2017.00134","title":"The NAG Sensor NagC Regulates LEE Gene Expression and Contributes to Gut Colonization by Escherichia coli O157:H7","year":2017,"lang":"en","type":"article","venue":"Frontiers in Cellular and Infection Microbiology","topic":"Escherichia coli research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":28,"is_retracted":false,"has_abstract":true,"ca_institutions":"Canadian Veterinary Medical Association","funders":"Fonds de Recherche du Québec - Santé; Natural Sciences and Engineering Research Council of Canada; Institut pour la Recherche en Santé Publique; Université de Montréal; European Commission","keywords":"Biology; Escherichia coli; Bacteroides thetaiotaomicron; Microbiology; Enterocyte; Secretion; Repressor; Operon; Gene expression; Bacteria; Bacteroides; Gene; Small intestine; Biochemistry","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001155244,0.0002866917,0.0002855901,0.0001813527,0.0001903977,0.000368749,0.000164123,0.0002918886,0.0007068848],"category_scores_gemma":[0.0001229321,0.0001632745,0.0001783694,0.0001052592,0.0003726048,0.0001467931,0.0003811287,0.0004532073,0.0002623626],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003116953,"about_ca_system_score_gemma":0.0002974609,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0009084287,"about_ca_topic_score_gemma":0.0009967877,"domain_scores_codex":[0.9998901,0.00001812324,0.000005618636,0.00001848055,0.00003052867,0.00003712383],"domain_scores_gemma":[0.9998869,0.00001533256,0.00002637949,0.000008845332,0.00002261588,0.00003993572],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001350303,0.0000178571,0.0004042185,0.0000170307,0.000001864609,0.00005422917,0.00001262524,0.00004449316,0.9985819,0.00007221429,0.000032046,0.0006265378],"study_design_scores_gemma":[0.00003892193,0.0002433521,0.06250052,0.00001696479,0.00002753472,0.000282009,0.0002344079,0.003721985,0.9301445,0.000286479,0.00248251,0.00002086749],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9945689,0.001601439,0.001728916,0.0001942932,0.00002831773,0.0000120018,0.0001361271,0.00007849655,0.001651456],"genre_scores_gemma":[0.9963704,0.0007593432,0.0007087026,0.0000651283,0.00001009461,0.00001330829,0.0001692315,0.00002744074,0.001876418],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0009084287,"threshold_uncertainty_score":0.002364755,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.005223204410206145,"score_gpt":0.2317347755411147,"score_spread":0.2265115711309085,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}