{"id":"W2609827426","doi":"10.3389/fpls.2017.00552","title":"Genome-Wide Association Mapping Reveals Multiple QTLs Governing Tolerance Response for Seedling Stage Chilling Stress in Indica Rice","year":2017,"lang":"en","type":"article","venue":"Frontiers in Plant Science","topic":"Genetic Mapping and Diversity in Plants and Animals","field":"Biochemistry, Genetics and Molecular Biology","cited_by":77,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"University of Waterloo; Indian Council of Agricultural Research; National Rice Research Institute, Indian Council of Agricultural Research","keywords":"Biology; Germplasm; Population; Quantitative trait locus; Seedling; Genetics; Genetic diversity; Association mapping; Genotype; Horticulture; Single-nucleotide polymorphism; Gene; Medicine","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00211742,0.0001274484,0.0001936172,0.00015461,0.0006245045,0.0001725984,0.0006179351,0.00011302,0.000001684892],"category_scores_gemma":[0.002707887,0.0001358777,0.00004227171,0.0001081861,0.00009847881,0.00002844231,0.0001642695,0.0001204182,0.000001707361],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000109749,"about_ca_system_score_gemma":0.0001158906,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00006535574,"about_ca_topic_score_gemma":0.0000416678,"domain_scores_codex":[0.9985194,0.00005359651,0.0002355201,0.0004658904,0.0002573026,0.0004683512],"domain_scores_gemma":[0.9991806,0.00009126399,0.0003285216,0.0002738386,0.00005083118,0.00007494561],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.000209198,0.00002177779,0.8157046,0.00002983012,0.00000584029,0.000006706066,0.0003761674,0.001651355,0.1814483,0.000001293438,0.0004359858,0.0001089644],"study_design_scores_gemma":[0.0009424895,0.00006338848,0.971065,0.0001693115,0.000004424156,0.000001339267,0.0009605614,0.004456315,0.01227918,0.00002586821,0.009765402,0.0002667183],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9917507,0.000235139,0.006288111,0.0001376419,0.0004687276,0.0002387985,0.0005294248,0.000006973317,0.0003444719],"genre_scores_gemma":[0.9914393,0.0001708594,0.007206571,0.00012686,0.00007365763,0.00001056434,0.00005845605,0.000006260337,0.0009074761],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1691691,"threshold_uncertainty_score":0.5540932,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0146133876096372,"score_gpt":0.2331699497454805,"score_spread":0.2185565621358433,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}