{"id":"W2609945758","doi":"10.1111/jfd.12634","title":"Pathologic features of mycobacteriosis in naturally infected Syngnathidae and novel transcriptome assembly in association with disease","year":2017,"lang":"en","type":"article","venue":"Journal of Fish Diseases","topic":"Aquatic life and conservation","field":"Agricultural and Biological Sciences","cited_by":18,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Prince Edward Island","funders":"","keywords":"Biology; Seahorse; Transcriptome; Granuloma; Histopathology; Pathology; Zoology; Immunology; Genetics; Gene; Gene expression","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001891047,0.00008280058,0.0002097525,0.00003072686,0.00006420262,0.00008466424,0.0001533631,0.0000588842,0.00001040827],"category_scores_gemma":[0.000740348,0.00003236174,0.00005869298,0.0001000452,0.00003299173,0.0004739588,0.00001397397,0.0001184576,1.272335e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003691831,"about_ca_system_score_gemma":0.00002953741,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001186048,"about_ca_topic_score_gemma":0.0007321041,"domain_scores_codex":[0.9992428,0.00005801069,0.0002614588,0.0000935826,0.0002316825,0.0001124325],"domain_scores_gemma":[0.9990323,0.0001828658,0.0005410106,0.00004008981,0.0001203471,0.00008344908],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0002137009,0.0001841231,0.9661784,0.0000170206,0.00001278798,0.00003802065,0.00006863044,0.000001724326,0.03003172,0.00001764181,0.00008842858,0.003147793],"study_design_scores_gemma":[0.0005397538,0.0001826108,0.9984905,0.0002006818,0.00004172909,0.000005323091,0.0001123848,0.00001191276,0.0001532079,0.0001489031,0.00003809393,0.00007488184],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9959355,0.0001692828,9.794134e-7,0.003667728,0.00004410825,0.00008342334,0.00005840986,0.000003795582,0.00003675532],"genre_scores_gemma":[0.9994587,0.0001056121,0.00002013884,0.0003286444,0.00005897942,0.000002848715,0.00000896457,6.635216e-7,0.00001542929],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.03231211,"threshold_uncertainty_score":0.1319674,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0133910708000652,"score_gpt":0.2219300539429595,"score_spread":0.2085389831428943,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}