{"id":"W2611563625","doi":"10.2142/biophys.45.s189_4","title":"2P280 Strongly hydrogen-bonded water molecule present in the rhodopsins with proton-pump activity","year":2005,"lang":"en","type":"article","venue":"Seibutsu Butsuri","topic":"Photoreceptor and optogenetics research","field":"Neuroscience","cited_by":0,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Molecule; Proton; Hydrogen bond; Chemistry; Hydrogen; Biophysics; Chemical physics; Physics; Biology; Organic chemistry; Nuclear physics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006396062,0.0003079055,0.0002523571,0.0001524707,0.0002577085,0.0001914908,0.00095383,0.0001084569,0.0002411309],"category_scores_gemma":[0.00008767535,0.0001759849,0.00009479689,0.0004577858,0.0002646399,0.0002827894,0.0002316595,0.0005874967,0.0003008611],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000137108,"about_ca_system_score_gemma":0.0001332088,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001555601,"about_ca_topic_score_gemma":0.0001690729,"domain_scores_codex":[0.9962072,0.0005931467,0.0002509296,0.0007240555,0.001164181,0.001060452],"domain_scores_gemma":[0.9987226,0.0001701615,0.00005805195,0.0008039799,0.00006739925,0.0001778566],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003095497,0.0006302293,0.00126008,0.00002755882,0.00001103714,0.00007805107,0.001607621,0.001517048,0.9929243,0.00009316494,0.000233123,0.001308178],"study_design_scores_gemma":[0.0008741209,0.0002682917,0.0008363916,0.00001257141,0.000007133272,0.00003346361,0.00004783449,0.004399948,0.9664028,0.00008914565,0.02676117,0.0002670897],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9842499,0.00001996307,0.0001098216,0.002780975,0.00005110851,0.002020678,0.00004389062,0.00007101057,0.01065267],"genre_scores_gemma":[0.997679,0.00003052393,0.00008812661,0.0003425057,0.0001807492,0.0004922752,0.000008161815,0.00004541977,0.001133249],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02652805,"threshold_uncertainty_score":0.7176456,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03883029236990687,"score_gpt":0.3045468949663243,"score_spread":0.2657166025964174,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}