{"id":"W2612730730","doi":"10.1371/journal.pone.0176880","title":"Transcriptome-wide analysis of alternative RNA splicing events in Epstein-Barr virus-associated gastric carcinomas","year":2017,"lang":"en","type":"article","venue":"PLoS ONE","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":36,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Sherbrooke","funders":"","keywords":"RNA splicing; Biology; Alternative splicing; RNA; Gene; Transcriptome; RNA-Seq; Genetics; Gene expression; Cancer research; Computational biology; Messenger RNA","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002493806,0.0001248463,0.0003737301,0.0005630004,0.0001592726,0.0003154751,0.000093592,0.0001679851,0.0003506951],"category_scores_gemma":[0.00025107,0.0001035707,0.0002691705,0.0006731055,0.0001057696,0.00009718303,0.0002010041,0.0001646448,0.00009772947],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001187207,"about_ca_system_score_gemma":0.000114724,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006036645,"about_ca_topic_score_gemma":0.001225558,"domain_scores_codex":[0.9998409,0.00002222113,0.00001200392,0.00006377705,0.00003816435,0.00002296493],"domain_scores_gemma":[0.999876,0.00004214983,0.00003692107,0.00001077434,0.00001801132,0.00001612544],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0005766028,0.00004558853,0.141031,0.0002047978,0.0003210032,0.0003603077,0.0002713368,0.001010209,0.8418122,0.0001241202,0.0002656006,0.01397718],"study_design_scores_gemma":[0.00001137428,0.0001012326,0.972787,0.00001176774,0.000189781,0.0007007425,0.0002398377,0.003044137,0.02122654,0.00014229,0.00153281,0.00001245559],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9973591,0.0008716654,0.0006416833,0.00001287177,0.000002796098,0.000005694636,0.000885724,0.00001430725,0.0002060159],"genre_scores_gemma":[0.9952269,0.0005379698,0.001182106,0.00002884725,0.000005523316,0.00001674915,0.002732872,0.00001129372,0.0002576876],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0006036645,"threshold_uncertainty_score":0.001318872,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0368691562001386,"score_gpt":0.2764601629806367,"score_spread":0.2395910067804981,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}