{"id":"W2612973481","doi":"","title":"Escherichia coli and Salmonella Derby Carry a Novel Family of Temperate Bacteriophages that Encode Extended-spectrum Beta-lactamase Genes","year":2017,"lang":"en","type":"article","venue":"IAFP 2017","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"ca_institutions":"McGill University","funders":"","keywords":"Gene; Escherichia coli; ENCODE; Salmonella; Genetics; Biology; Microbiology; Bacteriophage; Enterobacteriaceae; Virology; Bacteria","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0001847408,0.0002831212,0.0003591172,0.00003293587,0.0003112746,0.0001689033,0.0005102532,0.0002370474,0.00001563589],"category_scores_gemma":[0.00005979476,0.0002591925,0.000105207,0.00001969249,0.000468127,0.0000219084,0.0002887775,0.0001006237,0.000007410667],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001199617,"about_ca_system_score_gemma":0.0001060463,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001664648,"about_ca_topic_score_gemma":0.0001203447,"domain_scores_codex":[0.9986848,0.00004039281,0.000264408,0.0005141177,0.0001518474,0.0003444876],"domain_scores_gemma":[0.9982561,0.00001350053,0.0003851303,0.001149212,0.00006694724,0.0001290502],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001347812,0.00006098848,0.04151137,0.00005657073,0.00009159523,0.0000139036,0.00004031498,0.000001235406,0.9571539,0.00005239635,0.0004352506,0.000447738],"study_design_scores_gemma":[0.0005389412,0.0001078537,0.5019478,0.00003731302,0.0000369235,0.00001582665,0.00007489813,0.00001542462,0.4925599,0.0000227975,0.004408367,0.000233929],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9945104,0.002430937,0.0002762146,0.0001652278,0.0002965871,0.0002088055,0.0001365926,0.00001252946,0.001962736],"genre_scores_gemma":[0.9943388,0.002062204,0.001849538,0.00008277249,0.0001882195,0.000007285869,0.00003793958,0.00004063227,0.001392576],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4645939,"threshold_uncertainty_score":0.9999861,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02380330872247656,"score_gpt":0.2689698901440195,"score_spread":0.2451665814215429,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}