{"id":"W2615396352","doi":"","title":"Phylogenetic and Phenotypic Analysis of Isolates from Common and Rare Salmonella enterica Serovars","year":2017,"lang":"en","type":"article","venue":"IAFP 2017","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":false,"ca_institutions":"McGill University","funders":"","keywords":"Salmonella enterica; Serotype; Phylogenetic tree; Salmonella; Biology; Phylogenetics; Genetics; Virology; Gene; Bacteria","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004015974,0.0005664968,0.0004846241,0.001891098,0.0008771138,0.000718775,0.0003629222,0.0005028012,0.001118913],"category_scores_gemma":[0.001627974,0.0001906013,0.0006069712,0.002150679,0.0004212826,0.0003619982,0.0005888015,0.0007355032,0.0005011941],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002565628,"about_ca_system_score_gemma":0.00043142,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.004973002,"about_ca_topic_score_gemma":0.003545676,"domain_scores_codex":[0.9990978,0.0001283408,0.000112363,0.000222178,0.0001971563,0.0002422549],"domain_scores_gemma":[0.9985921,0.0003392974,0.0002397401,0.00009130192,0.0004796048,0.0002579934],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.001863697,0.0008372818,0.1380344,0.0002671831,0.0001001448,0.0009171744,0.001444348,0.0003874331,0.8386313,0.0002169631,0.0004353847,0.0168647],"study_design_scores_gemma":[0.00002436443,0.002227699,0.9175515,0.00004118143,0.0001746755,0.004557434,0.003020517,0.001153174,0.0669729,0.0001552029,0.00408403,0.00003722348],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9949803,0.0001745144,0.000715997,0.00008385958,0.00002286857,0.00006415393,0.002113302,0.00001387407,0.001831084],"genre_scores_gemma":[0.9918744,0.0001994262,0.002562652,0.000068605,0.00001850209,0.00004585835,0.00420959,0.00001683296,0.001004262],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.004973002,"threshold_uncertainty_score":0.009888113,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03227879535140038,"score_gpt":0.2624181582592576,"score_spread":0.2301393629078572,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}