{"id":"W2615673827","doi":"10.1139/gen-2016-0215","title":"Evaluating five different loci (<i>rbc</i>L, <i>rpo</i>B, <i>rpo</i>C1, <i>mat</i>K, and ITS) for DNA barcoding of Indian orchids","year":2017,"lang":"en","type":"article","venue":"Genome","topic":"Biological and pharmacological studies of plants","field":"Medicine","cited_by":35,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Shivaji University, Kolhapur","keywords":"Biology; DNA barcoding; Orchidaceae; rpoB; Endangered species; Locus (genetics); Botany; Evolutionary biology; Habitat; Ecology; Genetics; Gene","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":true,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001152753,0.0003856733,0.000393542,0.0008291877,0.000315876,0.0007065763,0.0004449755,0.0004212158,0.0005091546],"category_scores_gemma":[0.001666831,0.0002515995,0.0005401058,0.00078958,0.0004125959,0.0003209185,0.0004171203,0.0004381504,0.0002631088],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002144628,"about_ca_system_score_gemma":0.0003523701,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002131925,"about_ca_topic_score_gemma":0.005114433,"domain_scores_codex":[0.9990396,0.0002135966,0.00008137632,0.0003091171,0.0002468323,0.0001094613],"domain_scores_gemma":[0.9989445,0.0004167914,0.0002446311,0.00008209509,0.000181205,0.0001308542],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0006756243,0.0001739677,0.07616903,0.0003126953,0.0001405286,0.0001345234,0.0004123467,0.001705427,0.8930596,0.0001645582,0.0001157143,0.026936],"study_design_scores_gemma":[0.00005951616,0.002016725,0.3979091,0.0001103975,0.0009322804,0.000994557,0.0009463374,0.01232465,0.5798715,0.0002191572,0.004502222,0.000113548],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9945661,0.0005559917,0.003223257,0.00004728941,0.00001254222,0.0000331239,0.0005535496,0.00004068609,0.0009674688],"genre_scores_gemma":[0.9867444,0.0003553988,0.01084825,0.00006629332,0.000007396757,0.00003567737,0.001420488,0.00001236396,0.000509812],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002131925,"threshold_uncertainty_score":0.006096423,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.118788271461093,"score_gpt":0.3720120228570575,"score_spread":0.2532237513959645,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}