{"id":"W2616817562","doi":"10.1038/ncomms15451","title":"Whole genome analysis of a schistosomiasis-transmitting freshwater snail","year":2017,"lang":"en","type":"article","venue":"Nature Communications","topic":"Parasites and Host Interactions","field":"Immunology and Microbiology","cited_by":314,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Alberta; Health Sciences Centre; Sunnybrook Health Science Centre; University of Toronto; Carleton University","funders":"National Institute of Allergy and Infectious Diseases; National Institute of General Medical Sciences; Biotechnology and Biological Sciences Research Council; Center for Evolutionary and Theoretical Immunology; Natural Sciences and Engineering Research Council of Canada; American Heart Association; Canadian Institutes of Health Research; National Institutes of Health; Fundação de Amparo à Pesquisa do Estado de Minas Gerais; Conselho Nacional de Desenvolvimento Científico e Tecnológico; National Human Genome Research Institute; Nederlandse Organisatie voor Wetenschappelijk Onderzoek; Agence Nationale de la Recherche; National Centre for the Replacement, Refinement and Reduction of Animals in Research","keywords":"Snail; Biomphalaria glabrata; Biology; Schistosomiasis; Biomphalaria; Intermediate host; Genome; Freshwater snail; Schistosoma mansoni; Freshwater mollusc; Transmission (telecommunications); Host (biology); Ecology; Zoology; Helminths; Gene; Genetics; Computer science","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001489746,0.00009710703,0.0002637119,0.0002458327,0.001117106,0.00003532633,0.001543592,0.0002969412,0.0004094853],"category_scores_gemma":[0.0001480518,0.00008846804,0.000242195,0.000164256,0.0003428237,0.0001391782,0.0002525232,0.0008144797,0.0001657388],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002490813,"about_ca_system_score_gemma":0.0000267037,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002714962,"about_ca_topic_score_gemma":0.006592358,"domain_scores_codex":[0.9993181,0.00009995353,0.0002523641,0.0001494469,0.00002559596,0.0001545441],"domain_scores_gemma":[0.9966229,0.0001746306,0.0002715526,0.00276576,0.0001492197,0.00001589585],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00004107021,0.0003807609,0.07403117,0.000007966018,0.004499333,8.072735e-7,0.001395796,0.00003518613,0.9023671,0.01201761,0.003269422,0.001953785],"study_design_scores_gemma":[0.0002779679,0.00001671325,0.367278,0.00001356001,0.0008907726,0.000004385744,0.0001108609,0.00008692135,0.003216928,0.00004913764,0.6279405,0.0001142816],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8807321,0.0390555,0.0004035309,0.01386229,0.0008604325,0.00038442,0.002327789,0.0001376684,0.06223626],"genre_scores_gemma":[0.9950275,0.000222829,0.001395935,0.0001380726,0.00001021433,0.00001771417,0.0008332393,0.000008247032,0.002346258],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8991502,"threshold_uncertainty_score":0.8591988,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02326090800015905,"score_gpt":0.3330845702967884,"score_spread":0.3098236622966293,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}