{"id":"W2617086216","doi":"10.1038/s41598-017-02886-8","title":"E. coli promotes human Vγ9Vδ2 T cell transition from cytokine-producing bactericidal effectors to professional phagocytic killers in a TCR-dependent manner","year":2017,"lang":"en","type":"article","venue":"Scientific Reports","topic":"Immune Cell Function and Interaction","field":"Immunology and Microbiology","cited_by":28,"is_retracted":false,"has_abstract":true,"ca_institutions":"Institute of Infection and Immunity","funders":"Great Ormond Street Institute of Child Health; National Institute for Health and Care Research; Wellcome Trust","keywords":"T-cell receptor; Effector; Cytokine; T cell; Cell biology; Transition (genetics); Chemistry; Microbiology; Biology; Immunology; Immune system; Biochemistry; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009640181,0.0002109762,0.0001370324,0.00008237563,0.0000696721,0.0002960706,0.00007770072,0.0001472161,0.00157589],"category_scores_gemma":[0.00009934173,0.00008821346,0.0001276587,0.00009120105,0.00008531135,0.0001131672,0.0001323302,0.0003433034,0.0004750046],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001170012,"about_ca_system_score_gemma":0.0001383364,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000368636,"about_ca_topic_score_gemma":0.0003445756,"domain_scores_codex":[0.999871,0.00003135934,0.00001088222,0.00002039821,0.00001692029,0.00004948917],"domain_scores_gemma":[0.9999615,0.00001272409,0.000004685649,0.000007019425,0.000004708791,0.000009296726],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0006185796,0.0001275123,0.0006523264,0.00003801225,0.000004156754,0.0001165091,0.00004064448,0.0001028295,0.9961848,0.0000872756,0.000107237,0.001920136],"study_design_scores_gemma":[0.00007038561,0.001506848,0.01309634,0.00001627615,0.00001467126,0.0006814275,0.0001215012,0.001146191,0.9791731,0.00009881146,0.004069403,0.000005032989],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9980667,0.0004567693,0.0003740559,0.00002732677,0.00001243456,0.00001497492,0.0001275651,0.00001382172,0.0009062997],"genre_scores_gemma":[0.9976658,0.0002566921,0.0002652664,0.00004597968,0.000005425753,0.00001479873,0.0002991734,0.00000637523,0.001440508],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.00157589,"threshold_uncertainty_score":0.005271852,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01370934509758508,"score_gpt":0.2602790400463359,"score_spread":0.2465696949487508,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}