{"id":"W2618268848","doi":"10.1038/nature22401","title":"Establishment and cryptic transmission of Zika virus in Brazil and the Americas","year":2017,"lang":"en","type":"article","venue":"Nature","topic":"Mosquito-borne diseases and control","field":"Medicine","cited_by":668,"is_retracted":false,"has_abstract":false,"ca_institutions":"Ontario Institute for Cancer Research","funders":"National Institute of General Medical Sciences; National Heart, Lung, and Blood Institute; National Institute of Allergy and Infectious Diseases; Medical Research Council; Universidade de São Paulo; Conselho Nacional de Desenvolvimento Científico e Tecnológico; Wellcome Trust; Agence Nationale de la Recherche; Fundação de Amparo à Ciência e Tecnologia do Estado de Pernambuco; Abbott Laboratories; Fundação de Amparo à Pesquisa do Estado de São Paulo; Oxford Nanopore Technologies; National Institutes of Health; Fundação Oswaldo Cruz; United States Agency for International Development; National Health and Medical Research Council; Cancer Research UK; National Science Foundation","keywords":"Zika virus; Outbreak; Geography; Latin Americans; Transmission (telecommunications); Biology; Genome; Virology; Evolutionary biology; Virus; Genetics; Political science","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001098091,0.00006267892,0.0001910941,0.00002304313,0.00006445445,0.0000266513,0.00006618171,0.0001631656,0.00003432593],"category_scores_gemma":[0.0001021538,0.00003450336,0.00003431809,0.00002636798,0.0001397375,0.00004489088,0.0000225308,0.0004138962,4.20675e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000005791933,"about_ca_system_score_gemma":0.00002316013,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001262617,"about_ca_topic_score_gemma":0.00001350867,"domain_scores_codex":[0.9995648,0.00001899349,0.00008948264,0.0001179118,0.0001248442,0.00008394876],"domain_scores_gemma":[0.9995811,0.00004237196,0.00005649091,0.0002330046,0.00002422839,0.00006278177],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"observational","study_design_scores_codex":[0.007500101,0.0004099196,0.06069328,0.000562831,0.0001457425,0.0001499634,0.00188483,0.000002311672,0.02651337,0.005926406,0.004912079,0.8912992],"study_design_scores_gemma":[0.01194192,0.0001810083,0.957754,0.0002594262,0.0002150967,0.00001478328,0.0001913029,0.001239716,0.001163043,0.0009279088,0.02601315,0.00009867777],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9636625,0.0221136,0.0000149524,0.01219908,0.00004635825,0.0003037523,0.000006361726,0.000005615808,0.001647778],"genre_scores_gemma":[0.9974889,0.001000915,0.00006452805,0.001222307,0.00004094802,0.000007030638,0.0000018449,0.000004914893,0.0001686287],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8970607,"threshold_uncertainty_score":0.1798196,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0052794551461483,"score_gpt":0.2951864905884243,"score_spread":0.289907035442276,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}