{"id":"W2619076796","doi":"10.1016/j.anaerobe.2017.05.012","title":"Quantification, isolation and characterization of Bifidobacterium from the vaginal microbiomes of reproductive aged women","year":2017,"lang":"en","type":"article","venue":"Anaerobe","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":97,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of Saskatchewan","funders":"University of Saskatchewan","keywords":"Bacterial vaginosis; Biology; Microbiome; Bifidobacterium longum; Lactobacillus; Bifidobacterium; Dysbiosis; Context (archaeology); Microbiology; Bacteria; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005128511,0.00008750615,0.0001816334,0.00007181182,0.0003488832,0.00003016513,0.0002341819,0.00008263619,0.0001282633],"category_scores_gemma":[0.000380579,0.00006686922,0.00002848675,0.00008886154,0.0006641068,0.0002801554,0.00008303556,0.0001340486,0.00002298265],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000227315,"about_ca_system_score_gemma":0.00003724514,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0008384509,"about_ca_topic_score_gemma":0.00002506389,"domain_scores_codex":[0.9990731,0.0001891501,0.0002501181,0.0003180504,0.00003213028,0.0001374327],"domain_scores_gemma":[0.9982569,0.00009278716,0.0004212817,0.0009424231,0.0002776554,0.00000892267],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001106818,0.0000762936,0.08941337,0.000009276348,0.0001207759,1.00661e-7,0.001596321,2.773974e-7,0.9058321,0.000218349,0.00008995475,0.002532483],"study_design_scores_gemma":[0.0001775402,0.00005147634,0.581014,0.000009506873,0.00001019366,0.000002486688,0.0001172212,5.788141e-7,0.417223,0.00009651372,0.001260839,0.00003669025],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9978524,0.0001704723,0.0003191335,0.000912532,0.0003012842,0.0002515484,0.00008928312,0.00001235148,0.00009102748],"genre_scores_gemma":[0.9988537,0.0001465527,0.00004651349,0.000008448531,0.00004890736,0.00002007437,0.0001957033,0.000008384759,0.0006716828],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4916006,"threshold_uncertainty_score":0.2726848,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02206380863564427,"score_gpt":0.2785013736559547,"score_spread":0.2564375650203105,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}