{"id":"W2622922376","doi":"10.3168/jds.2017-12787","title":"Invited review: Inbreeding in the genomics era: Inbreeding, inbreeding depression, and management of genomic variability","year":2017,"lang":"en","type":"review","venue":"Journal of Dairy Science","topic":"Genetic and phenotypic traits in livestock","field":"Biochemistry, Genetics and Molecular Biology","cited_by":266,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Inbreeding; Inbreeding depression; Runs of Homozygosity; Biology; Genetic diversity; Genomics; Population; Genome; Genetics; Genomic information; Evolutionary biology; Single-nucleotide polymorphism; Demography; Gene; Genotype","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00536233,0.0002841737,0.0008914946,0.0001979815,0.0002083717,0.00007445344,0.002067694,0.0001748233,0.000003394311],"category_scores_gemma":[0.0003687348,0.0001852462,0.0002165579,0.0002670533,0.0006438735,0.00002718865,0.000680057,0.0004704276,4.804273e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00006446087,"about_ca_system_score_gemma":0.0003186903,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000004106335,"about_ca_topic_score_gemma":0.000001769068,"domain_scores_codex":[0.997532,0.0001682367,0.001129644,0.0004358142,0.0004399923,0.0002942782],"domain_scores_gemma":[0.9972692,0.00007203752,0.001701858,0.000671603,0.0001729323,0.0001123765],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00002872322,0.0001186492,0.001480378,0.01792412,0.0001708152,0.00001022953,0.000292914,0.00002944625,0.001299294,0.0002567179,0.002781007,0.9756077],"study_design_scores_gemma":[0.0005738824,0.0004285852,0.03011619,0.03210703,0.0007955338,0.0006564482,0.0001453123,0.000007200157,0.00005450443,0.0005788651,0.934048,0.0004884229],"study_design_candidate":"design_other","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.009340364,0.9887465,0.0003495207,0.0001053687,0.0004179543,0.0005438527,0.00001259975,0.000001382291,0.0004824246],"genre_scores_gemma":[0.004274686,0.9865221,0.008728114,0.0001774682,0.0002526085,0.00001061698,0.000004341794,0.00001510894,0.0000149754],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9751193,"threshold_uncertainty_score":0.755412,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05151497537480805,"score_gpt":0.3357041585815022,"score_spread":0.2841891832066941,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}