{"id":"W2624708804","doi":"10.3389/fpls.2017.01040","title":"Identification of Novel Associations of Candidate Genes with Resistance to Late Blight in Solanum tuberosum Group Phureja","year":2017,"lang":"en","type":"article","venue":"Frontiers in Plant Science","topic":"Plant Pathogens and Resistance","field":"Agricultural and Biological Sciences","cited_by":31,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Global Affairs Canada; Ministerio de Agricultura y Desarrollo Rural; Max-Planck-Gesellschaft; Deutscher Akademischer Austauschdienst; International Development Research Centre; James Hutton Institute","keywords":"Biology; Phytophthora infestans; Quantitative trait locus; Blight; Candidate gene; Solanum tuberosum; Germplasm; R gene; Plant disease resistance; Gene; Genetics; Association mapping; Oomycete; Solanum; Marker-assisted selection; Single-nucleotide polymorphism; Botany; Genotype","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007271988,0.00008414147,0.0002020678,0.00007023109,0.0002552917,0.0000635755,0.0006891583,0.00004375989,0.00000156189],"category_scores_gemma":[0.00008219112,0.00003713872,0.00002134108,0.0005197661,0.0002534875,0.0002699509,0.00005834632,0.000059805,5.658674e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000485268,"about_ca_system_score_gemma":0.00002787156,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002802102,"about_ca_topic_score_gemma":0.01932533,"domain_scores_codex":[0.9987966,0.0000185073,0.0002952915,0.0002978977,0.0003386969,0.0002529393],"domain_scores_gemma":[0.9993689,0.00003485038,0.0003392397,0.0001356504,0.00006585653,0.0000555163],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00004134288,0.00005272997,0.2693045,0.000006000249,0.000002048641,0.000003149174,0.00006348869,0.00004949873,0.7298242,0.0001653683,0.0001593448,0.0003283781],"study_design_scores_gemma":[0.0001532459,0.00003002615,0.9649917,0.00009638391,0.000003350039,9.405853e-7,0.00009680597,0.0004595125,0.03359611,0.00007142609,0.0003962523,0.0001041838],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9975036,0.0001087075,0.0002038869,0.0002660532,0.0002315743,0.0001696861,0.001231611,0.000005606757,0.0002792215],"genre_scores_gemma":[0.9980194,0.00006239167,0.001601446,0.00001472617,0.00001523003,0.000008333521,0.00002711722,5.655371e-7,0.0002508095],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6962281,"threshold_uncertainty_score":0.9985694,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01480811790883207,"score_gpt":0.2196126895439197,"score_spread":0.2048045716350876,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}