{"id":"W2624971041","doi":"10.1128/genomea.00536-17","title":"Complete Genome Sequences of Two Human Oral Microbiome Commensals: Streptococcus salivarius ATCC 25975 and <i>S. salivarius</i> ATCC 27945","year":2017,"lang":"en","type":"article","venue":"Genome Announcements","topic":"Oral microbiology and periodontitis research","field":"Dentistry","cited_by":10,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université Laval","funders":"Illinois Institute of Technology","keywords":"Streptococcus salivarius; Commensalism; Microbiome; Biology; Genome; Microbiology; Oral Microbiome; Lactobacillus salivarius; Genetics; Streptococcus; Bacteria; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","sts","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0009291734,0.0004986946,0.0008707556,0.0002037835,0.001558742,0.0005033726,0.001557873,0.0002653048,0.001912454],"category_scores_gemma":[0.00003764439,0.000491901,0.000180006,0.0001507353,0.001476082,0.0004898272,0.001208219,0.0004524577,0.0006503996],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001395231,"about_ca_system_score_gemma":0.0001050804,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003929968,"about_ca_topic_score_gemma":0.001332686,"domain_scores_codex":[0.9965372,0.0003259205,0.0008597807,0.0008900887,0.0003766108,0.001010407],"domain_scores_gemma":[0.9972987,0.00005938797,0.000658875,0.001425369,0.000314913,0.0002427208],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00007929185,0.0001797015,0.1097973,0.0001391382,0.0002738261,0.0001555625,0.000279046,0.000005013111,0.8873326,0.0003103341,0.001043171,0.0004049827],"study_design_scores_gemma":[0.009515074,0.001479048,0.6617615,0.00024402,0.0002464371,0.0003180927,0.0004801405,0.0000172374,0.01902544,0.002039214,0.3029342,0.001939701],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9874356,0.001334512,0.0000524305,0.0002078543,0.0005285863,0.0007887154,0.007168743,0.00006308828,0.002420493],"genre_scores_gemma":[0.9943517,0.000159966,0.0005352781,0.0002880345,0.0001920573,0.00004840158,0.001882246,0.00005196182,0.00249034],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8683072,"threshold_uncertainty_score":0.9997532,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.07071702762080989,"score_gpt":0.3638935185413242,"score_spread":0.2931764909205143,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}