{"id":"W2626114300","doi":"10.1128/genomea.00494-17","title":"Complete Genome Sequence of Acinetobacter calcoaceticus CA16, a Bacterium Capable of Degrading Diesel and Lignin","year":2017,"lang":"en","type":"article","venue":"Genome Announcements","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":15,"is_retracted":false,"has_abstract":true,"ca_institutions":"Agriculture and Agri-Food Canada; Western University","funders":"Agriculture and Agri-Food Canada; Natural Sciences and Engineering Research Council of Canada; Government of Canada","keywords":"Acinetobacter calcoaceticus; Whole genome sequencing; Biology; Bacteria; Genome; Plasmid; Metabolic pathway; Genetics; Gene; Lignin; Biochemistry; Acinetobacter; Botany","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002424766,0.000160437,0.0002660996,0.00003580688,0.0001980773,0.00004531398,0.0003907819,0.0000581868,0.0006123277],"category_scores_gemma":[0.00002750024,0.0001407476,0.00004117587,0.00007101296,0.0004209903,0.0002433461,0.0003518936,0.0000639775,0.00009772842],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00009012371,"about_ca_system_score_gemma":0.0000156478,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0009316784,"about_ca_topic_score_gemma":0.0001422183,"domain_scores_codex":[0.998767,0.00002789068,0.0003426039,0.0002943724,0.0002623474,0.0003057567],"domain_scores_gemma":[0.9990577,0.00001087838,0.0003723629,0.0004192901,0.00003184149,0.0001079447],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00001688729,0.0000354564,0.06921635,0.00002719083,0.0000204281,0.000002589822,0.0005284541,0.000005658034,0.9297786,0.000005040633,0.00009746954,0.0002658221],"study_design_scores_gemma":[0.001422187,0.0003285307,0.8570345,0.00005890309,0.0000532892,0.00001018093,0.0001662955,0.0001173194,0.05605246,0.00005026425,0.08420223,0.0005038496],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9947897,0.0000576405,0.00001705284,0.000104433,0.0001315024,0.0002407809,0.0009251497,0.000007700704,0.003726009],"genre_scores_gemma":[0.9980022,0.0001340047,0.0005835261,0.00009379486,0.00002176028,0.000003416993,0.00009053358,0.000009366138,0.001061399],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8737262,"threshold_uncertainty_score":0.6704559,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04081275877433469,"score_gpt":0.2538934613354826,"score_spread":0.2130807025611479,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}