{"id":"W2626288850","doi":"10.1111/tan.13070","title":"Strain‐based <scp>HLA</scp> association analysis identified <i><scp>HLA‐DRB1</scp>*09:01</i> associated with modern strain tuberculosis","year":2017,"lang":"en","type":"article","venue":"HLA","topic":"Tuberculosis Research and Epidemiology","field":"Medicine","cited_by":29,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Faculty of Medicine Siriraj Hospital, Mahidol University; Japan Science and Technology Agency; Mahidol University; University of Alberta","keywords":"Human leukocyte antigen; Tuberculosis; Allele; Mycobacterium tuberculosis; Biology; Haplotype; Typing; Virulence; Linkage disequilibrium; Immune system; Genetics; Immunology; Gene; Antigen; Medicine","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000316842,0.0002489008,0.0001792322,0.000321223,0.0002026505,0.0002612626,0.0001383095,0.000249348,0.003239561],"category_scores_gemma":[0.0007978696,0.00008446077,0.0002486439,0.0004467138,0.0002689119,0.00009318378,0.0002101921,0.0004661562,0.0002584895],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00008755115,"about_ca_system_score_gemma":0.0001099436,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001270051,"about_ca_topic_score_gemma":0.001229577,"domain_scores_codex":[0.9997703,0.00008451472,0.00002467441,0.00005573641,0.00003252893,0.00003214634],"domain_scores_gemma":[0.9991493,0.000189806,0.00032951,0.00007951338,0.00008360481,0.0001683046],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0007939848,0.0001053866,0.9644369,0.00003602301,0.0001729749,0.0005446764,0.00009810418,0.0001398953,0.02530411,0.00009732977,0.0002102989,0.0080603],"study_design_scores_gemma":[0.00002709664,0.0002836485,0.9946901,0.000007726484,0.00007311979,0.002031394,0.00007410358,0.0002869022,0.001947059,0.00007422679,0.0004993834,0.000005355517],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9992651,0.0001016239,0.0002499934,0.00002802619,0.000005038225,0.000003064488,0.00007802012,0.000003226128,0.0002658799],"genre_scores_gemma":[0.99954,0.00003389611,0.0001655333,0.00001775155,0.000007440345,0.000001499435,0.0001066642,0.000002392205,0.0001250525],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003239561,"threshold_uncertainty_score":0.01083744,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03271067192755164,"score_gpt":0.3155672009944885,"score_spread":0.2828565290669369,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}