{"id":"W2626933500","doi":"10.3389/fvets.2017.00092","title":"Whole Genome Sequencing of a Canadian Bovine Gammaherpesvirus 4 Strain and the Possible Link between the Viral Infection and Respiratory and Reproductive Clinical Manifestations in Dairy Cattle","year":2017,"lang":"en","type":"article","venue":"Frontiers in Veterinary Science","topic":"Herpesvirus Infections and Treatments","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":true,"ca_institutions":"Institut Universitaire de Cardiologie et de Pneumologie de Québec; Université Laval; University of Guelph; Université de Montréal","funders":"","keywords":"Seroprevalence; Herd; Biology; Virology; Cattle Diseases; Genome; Virus; Phylogenetic tree; Dairy cattle; Gene; Veterinary medicine; Genetics; Serology; Antibody; Medicine; Animal science","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002019588,0.0000898149,0.0002010269,0.0004279586,0.0005850967,0.00006772261,0.000108619,0.00005483487,0.000001589607],"category_scores_gemma":[0.0004330557,0.00006021885,0.000019719,0.0003103131,0.002390655,0.0003384718,0.00009165821,0.000233082,5.262843e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001480893,"about_ca_system_score_gemma":0.0004490518,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.03603696,"about_ca_topic_score_gemma":0.007728489,"domain_scores_codex":[0.9989637,0.0001290232,0.0002614728,0.000335323,0.0001109496,0.00019957],"domain_scores_gemma":[0.9992452,0.00006484729,0.0001165192,0.0004190028,0.00004240517,0.0001119905],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001001195,0.00001793342,0.9221624,0.00001999117,0.00002210386,0.00006108025,0.00159487,0.000007051644,0.000607934,0.00008958144,0.00001410599,0.07530281],"study_design_scores_gemma":[0.001097721,0.0005392845,0.9942529,0.00004923015,0.00002486643,0.0000665751,0.0003297336,0.000196925,0.00001736157,0.0004624392,0.002903724,0.00005930534],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9967854,0.0003967838,0.00004920473,0.001268155,0.0001975311,0.0004045854,0.00003463831,0.000005093201,0.0008585958],"genre_scores_gemma":[0.9985898,0.0001980462,0.0009648096,0.00007392243,0.0000865702,0.00001638586,0.000002197887,0.000005674627,0.00006256966],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.07524351,"threshold_uncertainty_score":0.9703822,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.06852248521646273,"score_gpt":0.3446708298540492,"score_spread":0.2761483446375865,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}