{"id":"W2636085960","doi":"10.1038/ismej.2017.95","title":"Unexpected genomic features in widespread intracellular bacteria: evidence for motility of marine chlamydiae","year":2017,"lang":"en","type":"article","venue":"The ISME Journal","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":35,"is_retracted":false,"has_abstract":true,"ca_institutions":"Genome British Columbia; University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada; Universität Wien; Austrian Science Fund; Tula Foundation; Compute Canada; Canadian Institute for Advanced Research; National Science Foundation","keywords":"Chlamydiae; Biology; Flagellum; Intracellular parasite; Genome; Obligate; Chlamydiales; Chlamydiaceae; Microbiology; Evolutionary biology; Gene; Bacteria; Genetics; Ecology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001105054,0.0001898555,0.000288294,0.0007571396,0.0002396944,0.0004352601,0.0001925887,0.0003996877,0.0009588709],"category_scores_gemma":[0.0006800185,0.0001680104,0.0003159025,0.000632465,0.000381351,0.0001691998,0.0005998359,0.000429428,0.0004458257],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00008940005,"about_ca_system_score_gemma":0.0001467612,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005758489,"about_ca_topic_score_gemma":0.0008092711,"domain_scores_codex":[0.9998441,0.0000120096,0.0000111848,0.00006740243,0.00003156863,0.00003366054],"domain_scores_gemma":[0.9993043,0.0001850747,0.0001944767,0.00009690373,0.00007252993,0.0001466694],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0002158415,0.00001967922,0.04117436,0.0001699247,0.00004623119,0.0004025626,0.0003860612,0.00007739123,0.9497722,0.0001476509,0.00008689389,0.007501167],"study_design_scores_gemma":[0.00001248587,0.0002001847,0.9618149,0.00004194834,0.0001299129,0.002975599,0.0004585267,0.00029979,0.02950817,0.0003141398,0.004221188,0.00002313009],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9935848,0.001680035,0.001980394,0.00007172454,0.00001325716,0.00001082054,0.001932549,0.00004522515,0.0006811967],"genre_scores_gemma":[0.9950541,0.0005996267,0.001937725,0.00009314385,0.00001893607,0.00001284555,0.001933349,0.0000184273,0.0003317587],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0009588709,"threshold_uncertainty_score":0.003207684,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05840313239461711,"score_gpt":0.3497236547835126,"score_spread":0.2913205223888956,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}