{"id":"W2656846713","doi":"10.1101/153270","title":"The grayling genome reveals selection on gene expression regulation after whole genome duplication","year":2017,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"McGill University; Génome Québec; Universitetet i Oslo; National Science Council; Norges Forskningsråd; Norwegian Sequencing Centre","keywords":"Biology; Gene duplication; Evolutionary biology; Salmo; Genome; Gene; Lineage (genetic); Genetics; Genome evolution; Negative selection; Comparative genomics; Genomics; Fishery; Fish <Actinopterygii>","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001264837,0.0001829464,0.0003389605,0.0004644275,0.0002032449,0.0003489937,0.0001263634,0.0002056326,0.001080764],"category_scores_gemma":[0.0001700919,0.0001501588,0.0003713578,0.0005699353,0.0001561947,0.0001109159,0.000384711,0.0003273938,0.0003744397],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000243473,"about_ca_system_score_gemma":0.0002398956,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002223442,"about_ca_topic_score_gemma":0.005023926,"domain_scores_codex":[0.9999046,0.000005590758,0.000004469136,0.00005202239,0.00001644251,0.00001691505],"domain_scores_gemma":[0.9999,0.00002473951,0.00003054452,0.00001272795,0.00001257635,0.00001944549],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.000291351,0.00001058235,0.02785617,0.0001844537,0.0001063021,0.0005274154,0.0003033639,0.0006623793,0.9585947,0.000452764,0.0005813917,0.01042913],"study_design_scores_gemma":[0.00002884877,0.0001528186,0.9396905,0.00004449247,0.0002076977,0.0009158461,0.0002823229,0.003349408,0.03895999,0.0009222831,0.01540247,0.00004333048],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9934198,0.0008017449,0.001642891,0.00005605497,0.00001078831,0.000004100406,0.002874921,0.0001958897,0.0009938756],"genre_scores_gemma":[0.9851719,0.0004165765,0.003263477,0.0001679683,0.00001156905,0.00001206334,0.009366484,0.0001428711,0.00144699],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002223442,"threshold_uncertainty_score":0.004420996,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01119139219112865,"score_gpt":0.2207504321960989,"score_spread":0.2095590400049702,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}