{"id":"W2674191287","doi":"10.1093/gbe/evx110","title":"Genetic Indicators of Drug Resistance in the Highly Repetitive Genome of Trichomonas vaginalis","year":2017,"lang":"en","type":"article","venue":"Genome Biology and Evolution","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":83,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; Centers for Disease Control and Prevention; Chang Gung Medical Foundation; Tulane University; York University; Grundy Educational Trust; National Institutes of Health","keywords":"Biology; Trichomonas vaginalis; Genetics; Single-nucleotide polymorphism; Drug resistance; Gene; Trichomoniasis; Genotype","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001549351,0.0002113958,0.0002114644,0.0008435445,0.000204519,0.0002791864,0.0001619738,0.000324762,0.001015186],"category_scores_gemma":[0.0007250824,0.0001247178,0.000241723,0.0006929764,0.0002022846,0.00009028452,0.0002295152,0.0003695567,0.000182878],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001991282,"about_ca_system_score_gemma":0.0001188875,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001720257,"about_ca_topic_score_gemma":0.002392688,"domain_scores_codex":[0.9997486,0.00004603737,0.00002082069,0.00008041391,0.000063236,0.00004081265],"domain_scores_gemma":[0.9995623,0.0001119006,0.0001814141,0.00003790835,0.00005378484,0.00005277076],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002855973,0.00005467104,0.05194368,0.00005772816,0.00006213287,0.000231644,0.0001833154,0.0001310472,0.9407563,0.00007700975,0.00005347629,0.00616336],"study_design_scores_gemma":[0.00001462793,0.0003008112,0.9589872,0.00001631543,0.00007804603,0.001365081,0.0001964955,0.0009154275,0.03677373,0.00009509136,0.001243571,0.00001352882],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.998122,0.0001956445,0.0007009947,0.00001905516,0.000003153703,0.00001119887,0.0005863365,0.0000216109,0.0003399436],"genre_scores_gemma":[0.9973416,0.00009362724,0.001226675,0.00002987285,0.000003103616,0.00001250574,0.0009625834,0.000009929429,0.0003202334],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001720257,"threshold_uncertainty_score":0.003420472,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01109567029163368,"score_gpt":0.2755823247348304,"score_spread":0.2644866544431967,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}